RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 DDX4Q9NQI0 724 aaKnown RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 FAM217BQ9NTX9 383 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 FAM8A1Q9UBU6 413 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CTNND2Q9UQB3 1225 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 TRPV2Q9Y5S1 764 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 SNX9Q9Y5X1 595 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 KIF13AQ9H1H9 1805 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 GVINP1Q7Z2Y8 2422 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 ARHGAP6O43182 974 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 HEXIM1O94992 359 aaKnown RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 PLA2G4AP47712 749 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 ALDH5A1P51649 535 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 GTPBP2Q9BX10 602 aaKnown RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 EVA1BQ9NVM1 165 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 SEPT10Q9P0V9 454 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 AKR1B15C9JRZ8 316 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 IKBKBO14920 756 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CLGNO14967 610 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 APOEP02649 317 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CCDC175P0C221 793 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CSF2RAP15509 400 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CD52P31358 61 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-202ENST00000379446 ACTR2P61160 394 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 IRX4P78413 519 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 GRIN1Q05586 938 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 SPECC1LQ69YQ0 1117 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 OR6B2Q6IFH4 312 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 PPP1R21Q6ZMI0 780 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■□□□□ 8.1
NEDD9-202ENST00000379446 ASIC4Q96FT7 647 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 EEF2KMTQ96G04 330 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 IDI2Q9BXS1 227 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 CSRNP2Q9H175 543 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 PARVGQ9HBI0 331 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 THEGQ9P2T0 379 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 MAN1B1Q9UKM7 699 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 PLA2G4CQ9UP65 541 aa7.03□□□□□ -1.28
NEDD9-202ENST00000379446 FMN2Q9NZ56 1722 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA8SH3BPF8 625 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 PARNO95453 639 aaKnown RBP7.02□□□□□ -1.28
NEDD9-202ENST00000379446 CKBP12277 381 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 PPP4CP60510 307 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 GBP6Q6ZN66 633 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 ITIH5Q86UX2 942 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 DBF4BQ8NFT6 615 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 OXER1Q8TDS5 423 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 CAPZA3Q96KX2 299 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 FTHL17Q9BXU8 183 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 RTFDC1Q9BY42 306 aaPredicted RBP7.02□□□□□ -1.28
NEDD9-202ENST00000379446 SIK2Q9H0K1 926 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 SLC24A3Q9HC58 644 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 AASDHPPTQ9NRN7 309 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF446Q9NWS9 450 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 SPG21Q9NZD8 308 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 CDY2AQ9Y6F7 541 aa7.02□□□□□ -1.28
NEDD9-202ENST00000379446 RGPD1P0DJD0 1748 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 EIF3CLB5ME19 914 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 ASAP2O43150 1006 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FGFR4P22455 802 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FKBP1AP62942 108 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FAM26FQ5R3K3 315 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FBXW10Q5XX13 1052 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 MAFAQ8NHW3 353 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SHDQ96IW2 340 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 EIF3CQ99613 913 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SMPD4Q9NXE4 827 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FAM198AQ9UFP1 575 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 PHLPP2Q6ZVD8 1323 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 CLIC2O15247 247 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 THP07101 528 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 PDGFRBP09619 1106 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 EFNA5P52803 228 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 KRT81Q14533 505 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SNX17Q15036 470 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 ZNF484Q5JVG2 852 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 METTL7BQ6UX53 244 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 VSTM4Q8IW00 320 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 PGLYRP2Q96PD5 576 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 TGS1Q96RS0 853 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 TAB2Q9NYJ8 693 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 TRPM5Q9NZQ8 1165 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SLC25A13Q9UJS0 675 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SNCAIPQ9Y6H5 919 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 SYNRGQ9UMZ2 1314 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 FAM205CA6NFA0 338 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 MAFGO15525 162 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 BCRP11274 1271 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 EZRP15311 586 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 GPC3P51654 580 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
NEDD9-202ENST00000379446 LPAL2Q16609 132 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 TOGARAM2Q6ZUX3 1019 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 NYAP1Q6ZVC0 841 aa7.02□□□□□ -1.29
NEDD9-202ENST00000379446 USP49Q70CQ1 688 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms