RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 B4GALNT4Q76KP1 1039 aa22.67■■□□□ 1.22
SKI-201ENST00000378536 BZW1Q7L1Q6 419 aaKnown RBP22.67■■□□□ 1.22
SKI-201ENST00000378536 KSR1Q8IVT5 923 aa22.67■■□□□ 1.22
SKI-201ENST00000378536 CDCA5Q96FF9 252 aa22.67■■□□□ 1.22
SKI-201ENST00000378536 AGAP1Q9UPQ3 857 aa22.67■■□□□ 1.22
SKI-201ENST00000378536 ITIH6Q6UXX5 1313 aa22.67■■□□□ 1.22
SKI-201ENST00000378536 STX2P32856 288 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
SKI-201ENST00000378536 PPATQ06203 517 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 MGARPQ8TDB4 240 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 PGBD4Q96DM1 585 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 ANO9A1A5B4 782 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 ADORA2BP29275 332 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 BASP1P80723 227 aaKnown RBP22.66■■□□□ 1.22
SKI-201ENST00000378536 FBXO16Q8IX29 292 aaPredicted RBP22.66■■□□□ 1.22
SKI-201ENST00000378536 AGO4Q9HCK5 861 aaKnown RBP22.66■■□□□ 1.22
SKI-201ENST00000378536 SYNGAP1Q96PV0 1343 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 PPP1R3GB7ZBB8 358 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 RPS6KA5O75582 802 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 ZMYND10O75800 440 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 AGPAT1Q99943 283 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 STK33Q9BYT3 514 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.66■■□□□ 1.22
SKI-201ENST00000378536 CYP26A1O43174 497 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 PDLIM2Q96JY6 352 aa22.66■■□□□ 1.22
SKI-201ENST00000378536 BUB1BO60566 1050 aaPredicted RBP22.65■■□□□ 1.22
SKI-201ENST00000378536 IL18RAPO95256 599 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 NR1I3Q14994 352 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 PGM5Q15124 567 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 TMEM106CQ9BVX2 250 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 ZRANB2O95218 330 aaKnown RBP eCLIP22.65■■□□□ 1.22
SKI-201ENST00000378536 SDC4P31431 198 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 HPSEQ9Y251 543 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 EXTL3O43909 919 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 NCOA4Q13772 614 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 PPP6R3Q5H9R7 873 aaPredicted RBP22.65■■□□□ 1.22
SKI-201ENST00000378536 TNIP3Q96KP6 325 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 CPA4Q9UI42 421 aa22.65■■□□□ 1.22
SKI-201ENST00000378536 CCDC188H7C350 402 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 GARSP41250 739 aaKnown RBP22.64■■□□□ 1.22
SKI-201ENST00000378536 SGSM1Q2NKQ1 1148 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 MKL1Q969V6 931 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 IP6K2Q9UHH9 426 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 TBX20Q9UMR3 447 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 ZBED1O96006 694 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 TAL1P17542 331 aaPredicted RBP22.64■■□□□ 1.22
SKI-201ENST00000378536 SMC1BQ8NDV3 1235 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 CCDC68Q9H2F9 335 aa22.64■■□□□ 1.22
SKI-201ENST00000378536 PTPRAP18433 802 aa22.64■■□□□ 1.21
SKI-201ENST00000378536 RNF180Q86T96 592 aa22.64■■□□□ 1.21
SKI-201ENST00000378536 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.64■■□□□ 1.211e-6■■■□□ 18.3
SKI-201ENST00000378536 STAP1Q9ULZ2 295 aa22.64■■□□□ 1.21
SKI-201ENST00000378536 ST3GAL1Q11201 340 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 TRIP13Q15645 432 aaPredicted RBP22.63■■□□□ 1.21
SKI-201ENST00000378536 PCDHAC2Q9Y5I4 1007 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 SPDYE16A6NNV3 312 aaPredicted RBP22.63■■□□□ 1.21
SKI-201ENST00000378536 ZNF484Q5JVG2 852 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 RWDD4Q6NW29 188 aaKnown RBP22.63■■□□□ 1.21
SKI-201ENST00000378536 VPS52Q8N1B4 723 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 DNAAF3Q8N9W5 541 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 PRDM5Q9NQX1 630 aaPredicted RBP22.63■■□□□ 1.21
SKI-201ENST00000378536 C17orf102A2RUQ5 167 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 PPFIA4O75335 1185 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 CPP00450 1065 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 UCHL3P15374 230 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 PPM1EQ8WY54 764 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 KIF9Q9HAQ2 790 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 ATRNO75882 1429 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 PSMC4P43686 418 aa22.63■■□□□ 1.21
SKI-201ENST00000378536 RYBPQ8N488 228 aaPredicted RBP22.62■■□□□ 1.21
SKI-201ENST00000378536 MANSC4A6NHS7 340 aaPredicted RBP22.62■■□□□ 1.21
SKI-201ENST00000378536 MED4Q9NPJ6 270 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 ZNF142P52746 1687 aaPredicted RBP22.62■■□□□ 1.21
SKI-201ENST00000378536 INHBAP08476 426 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 TFDP2Q14188 446 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 P2RX7Q99572 595 aaKnown RBP22.62■■□□□ 1.21
SKI-201ENST00000378536 KIFC3Q9BVG8 833 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 TMEM8AQ9HCN3 771 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 KBTBD4Q9NVX7 518 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 POLIQ9UNA4 740 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 FZD1Q9UP38 647 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 ATP8A1Q9Y2Q0 1164 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 VGLL4Q14135 290 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 ELMOD1Q8N336 334 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 RFFLQ8WZ73 363 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 SNX9Q9Y5X1 595 aa22.62■■□□□ 1.21
SKI-201ENST00000378536 APPL2Q8NEU8 664 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 MORC4Q8TE76 937 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 TARS2Q9BW92 718 aaKnown RBP22.61■■□□□ 1.21
SKI-201ENST00000378536 ASCC2Q9H1I8 757 aaPredicted RBP22.61■■□□□ 1.21
SKI-201ENST00000378536 POC1B-GALNT4F8VUJ3 575 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 TBC1D12O60347 775 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 SLC30A10Q6XR72 485 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 DONSONQ9NYP3 566 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 TRAPPC3O43617 180 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 NLRP11P59045 1033 aaKnown RBP22.61■■□□□ 1.21
SKI-201ENST00000378536 BCL9LQ86UU0 1499 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 AGPAT3Q9NRZ7 376 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 PARVAQ9NVD7 372 aa22.61■■□□□ 1.21
SKI-201ENST00000378536 CYTH3O43739 400 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms