RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 KRT35Q92764 455 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 MIS12Q9H081 205 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 ARMCX1Q9P291 453 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 SAP30BPQ9UHR5 308 aaKnown RBP11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 CHKBQ9Y259 395 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
ARHGEF39-201ENST00000378387 CLDN3O15551 220 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 OATP04181 439 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 MARCKSL1P49006 195 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 NEK3P51956 506 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 DYNLL2Q96FJ2 89 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PHF12Q96QT6 1004 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TRABDQ9H4I3 376 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 ZWILCHQ9H900 591 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 SAYSD1Q9NPB0 183 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PPARGC1AQ9UBK2 798 aaKnown RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 E7ENQ6 273 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 CDH16O75309 829 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 USP1O94782 785 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TDP2O95551 362 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 LYNP07948 512 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PLS3P13797 630 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 LMNB1P20700 586 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 ARFIP2P53365 341 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 RTP1P59025 263 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 KLRC3Q07444 240 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 MTMR2Q13614 643 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 MYBPC3Q14896 1274 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 ZBTB38Q8NAP3 1195 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PPP1R14CQ8TAE6 165 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TTC17Q96AE7 1141 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TMEM59LQ9UK28 342 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 ZNF232Q9UNY5 417 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 GOLGA8SH3BPF8 625 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 GOLGA8MH3BSY2 632 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TBX10O75333 385 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 IMPDH2P12268 514 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 KCNQ4P56696 695 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 DRAP1Q14919 205 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 KAZNQ674X7 775 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 WDR60Q8WVS4 1066 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 COA7Q96BR5 231 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 DNAJC12Q9UKB3 198 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 TDRKHQ9Y2W6 561 aaKnown RBP11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 MYH15Q9Y2K3 1946 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 RPTORQ8N122 1335 aa11.24□□□□□ -0.61
ARHGEF39-201ENST00000378387 PSMG1O95456 288 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 MPP3Q13368 585 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 MPP2Q14168 576 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 GALNTL6Q49A17 601 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 BTNL9Q6UXG8 535 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ATP8B4Q8TF62 1192 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ALG3Q92685 438 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 CEP63Q96MT8 703 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 SERPINB12Q96P63 405 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 TUBGCP5Q96RT8 1024 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ROPN1BQ9BZX4 212 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 LRMDAQ9H2I8 198 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ROPN1Q9HAT0 212 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.617e-8■■■■■ 41.7
ARHGEF39-201ENST00000378387 GJB6O95452 261 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 TTLL1O95922 423 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 GNAZP19086 355 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 FOXN2P32314 431 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ITGA8P53708 1063 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 ADARP55265 1226 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 DSG1Q02413 1049 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 CYP4A11Q02928 519 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 MGAT5Q09328 741 aa11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-201ENST00000378387 NPY5RQ15761 445 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms