RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZNF720Q7Z2F6 126 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 CMTR2Q8IYT2 770 aaKnown RBP14.55□□□□□ -0.08
CKAP2-202ENST00000378034 HACE1Q8IYU2 909 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 FMR1NBQ8N0W7 255 aaPredicted RBP14.55□□□□□ -0.08
CKAP2-202ENST00000378034 LRCH3Q96II8 777 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 ACO2Q99798 780 aaKnown RBP14.55□□□□□ -0.08
CKAP2-202ENST00000378034 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 SLC28A3Q9HAS3 691 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
CKAP2-202ENST00000378034 DCAF4L1Q3SXM0 396 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 ENGASEQ8NFI3 743 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 TRIM6Q9C030 488 aaPredicted RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 MRPL44Q9H9J2 332 aaKnown RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 TBX20Q9UMR3 447 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 EDN1P05305 212 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 CA3P07451 260 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 MYOGP15173 224 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 ATF7P17544 494 aaPredicted RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 NMT1P30419 496 aaKnown RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 UBE2HP62256 183 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 COASYQ13057 564 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 SNW1Q13573 536 aaKnown RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 STXBP4Q6ZWJ1 553 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 TIGD1Q96MW7 591 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 GBP4Q96PP9 640 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 EIF2AQ9BY44 585 aaKnown RBP14.54□□□□□ -0.08
CKAP2-202ENST00000378034 TMEM117Q9H0C3 514 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 IPPQ9Y573 584 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
CKAP2-202ENST00000378034 ZMYM2Q9UBW7 1377 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 NPTXRO95502 500 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 PIGRP01833 764 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 CUL4BQ13620 913 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 ZNF697Q5TEC3 545 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 ABI1Q8IZP0 508 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 FIBCD1Q8N539 461 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 RNF169Q8NCN4 708 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 SMG8Q8ND04 991 aaKnown RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 STRA6Q9BX79 667 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 PTPRHQ9HD43 1115 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 FNDC1Q4ZHG4 1894 aaPredicted RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 TOM1L1O75674 476 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 PPP1R37O75864 691 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 ITGA4P13612 1032 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 PROZP22891 400 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 EHHADHQ08426 723 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 BTG3Q14201 252 aaPredicted RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 PPP2R2DQ66LE6 453 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 MAP4K3Q8IVH8 894 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 ELOA2Q8IYF1 753 aaPredicted RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 SAMD11Q96NU1 681 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 TARS2Q9BW92 718 aaKnown RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
CKAP2-202ENST00000378034 EXOC7Q9UPT5 735 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
CKAP2-202ENST00000378034 LCHNA4D1U4 455 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 LINC01553A4QN01 128 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 FGFR1P11362 822 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 TAP1Q03518 808 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 PSMD2Q13200 908 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 EEF1DP3Q658K8 133 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 GLB1LQ6UWU2 654 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 CDR2LQ86X02 465 aaPredicted RBP14.52□□□□□ -0.09
CKAP2-202ENST00000378034 GRAMD1CQ8IYS0 662 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 CCDC47Q96A33 483 aaKnown RBP14.52□□□□□ -0.09
CKAP2-202ENST00000378034 BICD1Q96G01 975 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 CASD1Q96PB1 797 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 MRPL9Q9BYD2 267 aaKnown RBP14.52□□□□□ -0.09
CKAP2-202ENST00000378034 ZNF576Q9H609 170 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 GIT1Q9Y2X7 761 aa14.52□□□□□ -0.09
CKAP2-202ENST00000378034 TBKBP1A7MCY6 615 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 GADD45BO75293 160 aaPredicted RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 GCNT3O95395 438 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 MCF2P10911 925 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 ZC2HC1CQ53FD0 456 aaPredicted RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 CLLU1OSQ5K130 101 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 FAM26FQ5R3K3 315 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 AGMOQ6ZNB7 445 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 CLP1Q92989 425 aaKnown RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 TGS1Q96RS0 853 aaKnown RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 TCHPQ9BT92 498 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 RSAD1Q9HA92 442 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 TBC1D7Q9P0N9 293 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 USP20Q9Y2K6 914 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 RALGAPA2Q2PPJ7 1873 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 HNRNPDLO14979 420 aaKnown RBP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 INPPL1O15357 1258 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 EIF3DO15371 548 aaKnown RBP eCLIP14.51□□□□□ -0.09
CKAP2-202ENST00000378034 KLRC4O43908 158 aa14.51□□□□□ -0.09
CKAP2-202ENST00000378034 PRPF40AO75400 957 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms