RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCHCR1-201ENST00000376266 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
CCHCR1-201ENST00000376266 SART1O43290 800 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 POLR2MP0CAP2 368 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 PLCG1P19174 1290 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 CCNA1P78396 465 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 DHX9Q08211 1270 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 SFMBT2Q5VUG0 894 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 MIS18BP1Q6P0N0 1132 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 CENPTQ96BT3 561 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 ZNF570Q96NI8 536 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 TMEM60Q9H2L4 133 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 DAPK3O43293 454 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 SMNDC1O75940 238 aaKnown RBP eCLIP16.24■□□□□ 0.197e-7■■□□□ 14.2
CCHCR1-201ENST00000376266 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 ITIH4Q14624 930 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 KCTD19Q17RG1 926 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 MCF2L2Q86YR7 1114 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 ZBTB10Q96DT7 871 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 HOMER3Q9NSC5 361 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 SAMD15Q9P1V8 674 aa16.24■□□□□ 0.19
CCHCR1-201ENST00000376266 ASAP2O43150 1006 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 SERPING1P05155 500 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 MMEP08473 750 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 CLK2P49760 499 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 BAATQ14032 418 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 SLC30A10Q6XR72 485 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 TRPM8Q7Z2W7 1104 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 TMC3Q7Z5M5 1100 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 ANKRD35Q8N283 1001 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 SCFD2Q8WU76 684 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 ZNF317Q96PQ6 595 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 SELENOSQ9BQE4 189 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 DDX47Q9H0S4 455 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 CHN1P15882 459 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 HSD17B4P51659 736 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 ZNF268Q14587 947 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 CENPPQ6IPU0 288 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 ELAC2Q9BQ52 826 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 GLT8D2Q9H1C3 349 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 MROH8Q9H579 483 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 LRRC4CQ9HCJ2 640 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 COL20A1Q9P218 1284 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
CCHCR1-201ENST00000376266 CCDC194A0A1B0GVG4 234 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 F8VZ95 297 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 FGFR1OPO95684 399 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 ENOX2Q16206 610 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 PIGWQ7Z7B1 504 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 CABP7Q86V35 215 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 SHCBP1Q8NEM2 672 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 TLCD1Q96CP7 247 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 C7orf25Q9BPX7 421 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 CYP39A1Q9NYL5 469 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 NQO1P15559 274 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 ARID5AQ03989 594 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 LRRC34Q8IZ02 419 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 SYTL5Q8TDW5 730 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 PBKQ96KB5 322 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 PACSIN1Q9BY11 444 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 CORO1CQ9ULV4 474 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 THSD7BQ9C0I4 1608 aa16.22■□□□□ 0.19
CCHCR1-201ENST00000376266 CES2O00748 559 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 CAND2O75155 1236 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 KIF4AO95239 1232 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 CCND1P24385 295 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 COPB2P35606 906 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 RBBP5Q15291 538 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 YIPF3Q9GZM5 350 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 NUCKS1Q9H1E3 243 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 ETAA1Q9NY74 926 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 AMACRQ9UHK6 382 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 KRIT1O00522 736 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 VIMP08670 466 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 EIF3BP55884 814 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 KCNJ2P63252 427 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 AMPD3Q01432 767 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 SLC18A3Q16572 532 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 PTPROQ16827 1216 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 AGAP1Q9UPQ3 857 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 ATP8A1Q9Y2Q0 1164 aa16.21■□□□□ 0.19
CCHCR1-201ENST00000376266 A0A087X0T9 212 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 ANKRD33BA6NCL7 494 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 PGRMC1O00264 195 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 PGK2P07205 417 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 FAM228BP0C875 321 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 GHRHRQ02643 423 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 GPR142Q7Z601 462 aa16.2■□□□□ 0.18
CCHCR1-201ENST00000376266 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms