RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZC3H3Q8IXZ2 948 aaKnown RBP25.08■■□□□ 1.61
HLA-C-202ENST00000376237 SRRTQ9BXP5 876 aaKnown RBP25.08■■□□□ 1.61
HLA-C-202ENST00000376237 IKZF4Q9H2S9 585 aa25.08■■□□□ 1.61
HLA-C-202ENST00000376237 THAP9Q9H5L6 903 aa25.08■■□□□ 1.61
HLA-C-202ENST00000376237 GPR182O15218 404 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 CLIC2O15247 247 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 TSPAN1O60635 241 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 EDN1P05305 212 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 GSE1Q14687 1217 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 FBXO47Q5MNV8 452 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 SLC39A4Q6P5W5 647 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 LRRC8DQ7L1W4 858 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 FANCLQ9NW38 375 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 DMAC2Q9NW81 257 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 NOC2LQ9Y3T9 749 aaKnown RBP25.07■■□□□ 1.6
HLA-C-202ENST00000376237 SIP14410 1827 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 CLDN3O15551 220 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 PARNO95453 639 aaKnown RBP25.07■■□□□ 1.6
HLA-C-202ENST00000376237 ARF4P18085 180 aaPredicted RBP25.07■■□□□ 1.6
HLA-C-202ENST00000376237 FAM43BQ6ZT52 329 aaPredicted RBP25.07■■□□□ 1.6
HLA-C-202ENST00000376237 FILIP1Q7Z7B0 1213 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 FAM114A1Q8IWE2 563 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 POMGNT1Q8WZA1 660 aa25.07■■□□□ 1.6
HLA-C-202ENST00000376237 A0A1B0GUA9 196 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 GOLGA6L3A6NEY3 463 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 B4GALT5O43286 388 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 GNA14O95837 355 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 CLTBP09497 229 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 PROZP22891 400 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 ADSSP30520 456 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 UVSSAQ2YD98 709 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 TRAF7Q6Q0C0 670 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 LRRC55Q6ZSA7 311 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 APBB1IPQ7Z5R6 666 aaPredicted RBP25.06■■□□□ 1.6
HLA-C-202ENST00000376237 FAM228AQ86W67 206 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 XXYLT1Q8NBI6 393 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 ABHD8Q96I13 439 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 TCHPQ9BT92 498 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 NOC4LQ9BVI4 516 aaKnown RBP25.06■■□□□ 1.6
HLA-C-202ENST00000376237 HIPK3Q9H422 1215 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 PTPRHQ9HD43 1115 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 AGPAT5Q9NUQ2 364 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 USP20Q9Y2K6 914 aa25.06■■□□□ 1.6
HLA-C-202ENST00000376237 A0A0B4J269 797 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 TTLL13PA6NNM8 815 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 TISP43B9A030 160 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 N4BP3O15049 544 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 LDHAP00338 332 aaKnown RBP25.05■■□□□ 1.6
HLA-C-202ENST00000376237 FGFR4P22455 802 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 MCL1Q07820 350 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 NOTUMQ6P988 496 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 MPZL3Q6UWV2 235 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 CBWD1Q9BRT8 395 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 MKNK1Q9BUB5 465 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 KIAA1586Q9HCI6 787 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 CHST12Q9NRB3 414 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 SAMSN1Q9NSI8 373 aaKnown RBP25.05■■□□□ 1.6
HLA-C-202ENST00000376237 TMEM39AQ9NV64 488 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 HSPBP1Q9NZL4 362 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 TBX21Q9UL17 535 aa25.05■■□□□ 1.6
HLA-C-202ENST00000376237 EXOC3O60645 756 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 MATR3P43243 847 aaKnown RBP eCLIP25.04■■□□□ 1.6
HLA-C-202ENST00000376237 LPIN1Q14693 890 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 CDKAL1Q5VV42 579 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 CCDC51Q96ER9 411 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 ADPGKQ9BRR6 497 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 ST3GAL5Q9UNP4 418 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 FRMD4BQ9Y2L6 1034 aa25.04■■□□□ 1.6
HLA-C-202ENST00000376237 GHRP10912 638 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 ZNF18P17022 549 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 HOXA11P31270 313 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-202ENST00000376237 CYP2J2P51589 502 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 SPAG1Q07617 926 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 ZBTB45Q96K62 511 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-202ENST00000376237 HSD3B7Q9H2F3 369 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 ANKFY1Q9P2R3 1169 aa25.03■■□□□ 1.6
HLA-C-202ENST00000376237 MAGEC2Q9UBF1 373 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-202ENST00000376237 AGO2Q9UKV8 859 aaKnown RBP25.03■■□□□ 1.6
HLA-C-202ENST00000376237 FSD2A1L4K1 749 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 MAPK13O15264 365 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 SLC16A3O15427 465 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 CDK11BP21127 795 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PSMC2P35998 433 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 NFX1Q12986 1120 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PAK2Q13177 524 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 ZNF568Q3ZCX4 644 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 CPB2Q96IY4 423 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 MSTO1Q9BUK6 570 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PCIF1Q9H4Z3 704 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PDZD7Q9H5P4 517 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 AGO3Q9H9G7 860 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PADI3Q9ULW8 664 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 PIN4Q9Y237 131 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 ABLIM1O14639 778 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 MCF2P10911 925 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 EEF1GP26641 437 aaKnown RBP25.02■■□□□ 1.6
HLA-C-202ENST00000376237 NOLC1Q14978 699 aaKnown RBP eCLIP25.02■■□□□ 1.61e-6■■■■□ 25
HLA-C-202ENST00000376237 KYAT1Q16773 422 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 CEP135Q66GS9 1140 aa25.02■■□□□ 1.6
HLA-C-202ENST00000376237 SLC27A1Q6PCB7 646 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms