RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 MMP19Q99542 508 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 OSBPL1AQ9BXW6 950 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 ZCCHC17Q9NP64 241 aaKnown RBP14.54□□□□□ -0.08
COL4A1-201ENST00000375820 ARFIP2P53365 341 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 SESN2P58004 480 aaPredicted RBP14.54□□□□□ -0.08
COL4A1-201ENST00000375820 NLRP11P59045 1033 aaKnown RBP14.54□□□□□ -0.08
COL4A1-201ENST00000375820 LRRC74AQ0VAA2 488 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 TJAP1Q5JTD0 557 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 ADNPQ9H2P0 1102 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 F8W8V4 182 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 ZNF185O15231 689 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 GRIK1P39086 918 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 TMEM62Q0P6H9 643 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 SLC30A5Q8TAD4 765 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 LRRC37BQ96QE4 947 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
COL4A1-201ENST00000375820 MAN1A2O60476 641 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 TDP2O95551 362 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 NNMTP40261 264 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 KDSRQ06136 332 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 KIZQ2M2Z5 673 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 SPDYAQ5MJ70 313 aa14.54□□□□□ -0.08
COL4A1-201ENST00000375820 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 RGS7P49802 495 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CDH6P55285 790 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ADGRF4Q8IZF3 695 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 PRMT1Q99873 361 aaKnown RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 RNF146Q9NTX7 359 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 TRIM33Q9UPN9 1127 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ADCK2Q7Z695 626 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CLMNQ96JQ2 1002 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 STRBPQ96SI9 672 aaKnown RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 LXNQ9BS40 222 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 SENP1Q9P0U3 644 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 SPP2Q13103 211 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CCDC137Q6PK04 289 aaKnown RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 BSDC1Q9NW68 430 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 SEL1LQ9UBV2 794 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ARHGEF12Q9NZN5 1544 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 UPP2O95045 317 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CDC27P30260 824 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ARSEP51690 589 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 C2orf69Q8N8R5 385 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 DTX3LQ8TDB6 740 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 DCAF4Q8WV16 495 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 LGALS16A8MUM7 142 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 TYK2P29597 1187 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ALCAMQ13740 583 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 DMC1Q14565 340 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 SF3B3Q15393 1217 aaKnown RBP14.53□□□□□ -0.08
COL4A1-201ENST00000375820 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 NAALADL2Q58DX5 795 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 FAM117BQ6P1L5 589 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 PNMA3Q9UL41 463 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 ARAP3Q8WWN8 1544 aa14.53□□□□□ -0.08
COL4A1-201ENST00000375820 CALB1P05937 261 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 ABCD1P33897 745 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 RAD23BP54727 409 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 TNFAIP2Q03169 654 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 TEX12Q9BXU0 123 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 MARCOQ9UEW3 520 aaPredicted RBP14.52□□□□□ -0.08
COL4A1-201ENST00000375820 ERBB3P21860 1342 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 ATP1A1P05023 1023 aaKnown RBP14.52□□□□□ -0.08
COL4A1-201ENST00000375820 BCAR1P56945 870 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.08
COL4A1-201ENST00000375820 IZUMO3Q5VZ72 239 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 RRM2BQ7LG56 351 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 ETNK1Q9HBU6 452 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 V9GYQ6 96 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 EMSYQ7Z589 1322 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 CYP26A1O43174 497 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 KRT17Q04695 432 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.08
COL4A1-201ENST00000375820 RBAKQ9NYW8 714 aaPredicted RBP14.52□□□□□ -0.08
COL4A1-201ENST00000375820 KCNN4O15554 427 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 ASNSP08243 561 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 CTSHP09668 335 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 SULT1E1P49888 294 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 PPP2R2AP63151 447 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 NECTIN1Q15223 517 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 PCSK7Q16549 785 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-201ENST00000375820 IL31Q6EBC2 164 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 EMBQ6PCB8 327 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 ICA1LQ8NDH6 482 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 CPA5Q8WXQ8 436 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 TMA16Q96EY4 203 aaKnown RBP14.52□□□□□ -0.09
COL4A1-201ENST00000375820 ASPSCR1Q9BZE9 553 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 COA1Q9GZY4 146 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 CYP26B1Q9NR63 512 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 GNAT1P11488 350 aa14.52□□□□□ -0.09
COL4A1-201ENST00000375820 TFDP2Q14188 446 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms