RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 KCNK16Q96T55 309 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LMTK3Q96Q04 1460 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 ELF1P32519 619 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 SLC1A1P43005 524 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 TRABDQ9H4I3 376 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 STAP1Q9ULZ2 295 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 GNA15P30679 374 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 SDC4P31431 198 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 RAD54LQ92698 747 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 OSBP2Q969R2 916 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 KDSRQ06136 332 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 ACAP3Q96P50 834 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 TRIM62Q9BVG3 475 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 GID8Q9NWU2 228 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 PCDHGB4Q9UN71 923 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 GOLGA8IPA6NC78 632 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 GOLGA8JA6NMD2 632 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 ENO1P06733 434 aaKnown RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 ALDH18A1P54886 795 aaKnown RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.743e-7■■■□□ 17.5
SPEN-201ENST00000375759 VAMP7P51809 220 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 NLRP11P59045 1033 aaKnown RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 CCDC15Q0P6D6 951 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 TRPM8Q7Z2W7 1104 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 PHF21AQ96BD5 680 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 SERPINB1P30740 379 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 RECQLP46063 649 aaPredicted RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 CTTNQ14247 550 aaKnown RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 AASDHQ4L235 1098 aaPredicted RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 PRUNE1Q86TP1 453 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 TEX2Q8IWB9 1127 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 DCAF4Q8WV16 495 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 COASYQ13057 564 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 RNF219Q5W0B1 726 aaPredicted RBP10.4□□□□□ -0.74
SPEN-201ENST00000375759 PDLIM2Q96JY6 352 aa10.4□□□□□ -0.74
SPEN-201ENST00000375759 TRIM49BA6NDI0 452 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 KCNQ3O43525 872 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 CYP2C19P33261 490 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 ARSEP51690 589 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 PRAMEP78395 509 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 DRAP1Q14919 205 aaPredicted RBP10.4□□□□□ -0.75
SPEN-201ENST00000375759 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.75
SPEN-201ENST00000375759 ZFATQ9P243 1243 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 RFX7Q2KHR2 1363 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 KRT87PA6NCN2 255 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.75
SPEN-201ENST00000375759 PLEKHM3Q6ZWE6 761 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 FAM167AQ96KS9 214 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 SNX12Q9UMY4 172 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 LARGE1O95461 756 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 TMEM154Q6P9G4 183 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 NLRP10Q86W26 655 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 ATL2Q8NHH9 583 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 RNPC3Q96LT9 517 aaKnown RBP10.4□□□□□ -0.75
SPEN-201ENST00000375759 TOPORSQ9NS56 1045 aaPredicted RBP10.4□□□□□ -0.75
SPEN-201ENST00000375759 LZTS1Q9Y250 596 aa10.4□□□□□ -0.75
SPEN-201ENST00000375759 ARHGEF5Q12774 1597 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 KLHL2O95198 593 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 BCAR1P56945 870 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 KRT17Q04695 432 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 UBE2SQ16763 222 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 DSTYKQ6XUX3 929 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 SCFD1Q8WVM8 642 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 CYFIP2Q96F07 1278 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 SGSM3Q96HU1 749 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 RUNX1T1Q06455 604 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 LONP2Q86WA8 852 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 PUS3Q9BZE2 481 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 PSD3Q9NYI0 1048 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 ATP1A1P05023 1023 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 DYNLL1P63167 89 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 RFX8Q6ZV50 586 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 DDX42Q86XP3 938 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPEN-201ENST00000375759 ARL8AQ96BM9 186 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 RANBP17Q9H2T7 1088 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 NPHS2Q9NP85 383 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 TTC26A0AVF1 554 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 VCAM1P19320 739 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 FGFR4P22455 802 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 GCLMP48507 274 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 FBXW4P57775 412 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 MTHFD1LQ6UB35 978 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 PCYOX1LQ8NBM8 494 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 FAM47DPA6NHR8 397 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 GOLGA8TH3BQL2 631 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 APOL1O14791 398 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 PRELPP51888 382 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms