RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 NTHL1P78549 312 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 DSG1Q02413 1049 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 ZNF252P-AS1Q0IIN9 211 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 TROAPQ12815 778 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 CEP55Q53EZ4 464 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 LONP2Q86WA8 852 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 LY9Q9HBG7 655 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 RXFP3Q9NSD7 469 aa19.7■□□□□ 0.74
H2AFX-201ENST00000375167 ZNF623O75123 536 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 CSDE1O75534 798 aaKnown RBP19.69■□□□□ 0.74
H2AFX-201ENST00000375167 SATB1Q01826 763 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 CYB5R4Q7L1T6 521 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 GLYCTKQ8IVS8 523 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 DNASE1L2Q92874 299 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 GCOM2Q9BZD3 368 aaPredicted RBP19.69■□□□□ 0.74
H2AFX-201ENST00000375167 ARRDC1-AS1Q9H2J1 176 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 MARCH5Q9NX47 278 aa19.69■□□□□ 0.74
H2AFX-201ENST00000375167 NBEAQ8NFP9 2946 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 CREMQ03060 361 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 CCDC6Q16204 474 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 LILRA6Q6PI73 481 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 CATIPQ7Z7H3 387 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 RNF168Q8IYW5 571 aaPredicted RBP19.68■□□□□ 0.74
H2AFX-201ENST00000375167 ZNF687Q8N1G0 1237 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 FAM167AQ96KS9 214 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 WASF3Q9UPY6 502 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 MAFBQ9Y5Q3 323 aaPredicted RBP19.68■□□□□ 0.74
H2AFX-201ENST00000375167 SPAG17Q6Q759 2223 aa19.68■□□□□ 0.74
H2AFX-201ENST00000375167 SHISA7A6NL88 538 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 IFIT3O14879 490 aaKnown RBP19.67■□□□□ 0.74
H2AFX-201ENST00000375167 AXIN1O15169 862 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 ECI2O75521 394 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 HNRNPA1P09651 372 aaKnown RBP eCLIP19.67■□□□□ 0.74
H2AFX-201ENST00000375167 LIN9Q5TKA1 542 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 RSAD1Q9HA92 442 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 LMAN1LQ9HAT1 526 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 FNIP2Q9P278 1114 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 TCEAL9Q9UHQ7 104 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 SDK1Q7Z5N4 2213 aa19.67■□□□□ 0.74
H2AFX-201ENST00000375167 XYLBO75191 536 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 OR1G1P47890 313 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 RNF43Q68DV7 783 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 HEATR6Q6AI08 1181 aaKnown RBP19.66■□□□□ 0.74
H2AFX-201ENST00000375167 NPAS3Q8IXF0 933 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 ITFG1Q8TB96 612 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 LOXL4Q96JB6 756 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 POLIQ9UNA4 740 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 CNTNAP2Q9UHC6 1331 aa19.66■□□□□ 0.74
H2AFX-201ENST00000375167 HELZ2Q9BYK8 2649 aaKnown RBP19.65■□□□□ 0.74
H2AFX-201ENST00000375167 POMCP01189 267 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 TRDNQ13061 729 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 SOWAHCQ53LP3 525 aaPredicted RBP19.65■□□□□ 0.74
H2AFX-201ENST00000375167 PPM1LQ5SGD2 360 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 AGMOQ6ZNB7 445 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 CTCFLQ8NI51 663 aaPredicted RBP19.65■□□□□ 0.74
H2AFX-201ENST00000375167 MBOAT7Q96N66 472 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 DSCC1Q9BVC3 393 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 SCNM1Q9BWG6 230 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 SENP2Q9HC62 589 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 PCDHB2Q9Y5E7 798 aa19.65■□□□□ 0.74
H2AFX-201ENST00000375167 ITPR1Q14643 2758 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 MEIS1O00470 390 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 GIPC1O14908 333 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 EPN2O95208 641 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 CDC42EP1Q00587 391 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 SART3Q15020 963 aaKnown RBP19.64■□□□□ 0.73
H2AFX-201ENST00000375167 PLEKHM2Q8IWE5 1019 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 GPR65Q8IYL9 337 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 SPEM1Q8N4L4 309 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 FAM3CQ92520 227 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 INO80BQ9C086 356 aaPredicted RBP19.64■□□□□ 0.73
H2AFX-201ENST00000375167 CHST7Q9NS84 486 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 ANKFY1Q9P2R3 1169 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 FBXW11Q9UKB1 542 aa19.64■□□□□ 0.73
H2AFX-201ENST00000375167 ADAMTS20P59510 1910 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 AKAP13Q12802 2813 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 NR1I2O75469 434 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 EFEMP2O95967 443 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 PSAPP07602 524 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 SMARCA1P28370 1054 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 HOXA9P31269 272 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 ZNF76P36508 570 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 AFF1P51825 1210 aaKnown RBP19.63■□□□□ 0.73
H2AFX-201ENST00000375167 RILPL2Q969X0 211 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 B3GALT6Q96L58 329 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 OSBPL3Q9H4L5 887 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 BRD9Q9H8M2 597 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 GABBR1Q9UBS5 961 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 KCNH3Q9ULD8 1083 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 WDR81Q562E7 1941 aa19.63■□□□□ 0.73
H2AFX-201ENST00000375167 CCL16O15467 120 aa19.62■□□□□ 0.73
H2AFX-201ENST00000375167 PAPSS2O95340 614 aaPredicted RBP19.62■□□□□ 0.73
H2AFX-201ENST00000375167 C8AP07357 584 aa19.62■□□□□ 0.73
H2AFX-201ENST00000375167 RPL17P18621 184 aaKnown RBP19.62■□□□□ 0.73
H2AFX-201ENST00000375167 USP41Q3LFD5 358 aa19.62■□□□□ 0.73
H2AFX-201ENST00000375167 CATSPER4Q7RTX7 472 aa19.62■□□□□ 0.73
H2AFX-201ENST00000375167 SMAP1Q8IYB5 467 aaPredicted RBP19.62■□□□□ 0.73
H2AFX-201ENST00000375167 COLGALT2Q8IYK4 626 aa19.62■□□□□ 0.73
H2AFX-201ENST00000375167 ING5Q8WYH8 240 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms