RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CPB2Q96IY4 423 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 PDZD7Q9H5P4 517 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
HSPG2-202ENST00000374676 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 GCNT3O95395 438 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 MBD3O95983 291 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 STAG3L1P0CL83 205 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 ATP2A2P16615 1042 aaKnown RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 PROZP22891 400 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 APBB1IPQ7Z5R6 666 aaPredicted RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 ZNF598Q86UK7 904 aaKnown RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 NPAS4Q8IUM7 802 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 MYOCDQ8IZQ8 938 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 HPS3Q969F9 1004 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 ACCSQ96QU6 501 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 TARS2Q9BW92 718 aaKnown RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 FGFBP2Q9BYJ0 223 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
HSPG2-202ENST00000374676 FAM105AQ9NUU6 356 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 RMND1Q9NWS8 449 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 EXOC7Q9UPT5 735 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 PCDHA5Q9Y5H7 936 aa12.47□□□□□ -0.41
HSPG2-202ENST00000374676 UBE4BO95155 1302 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 ABLIM1O14639 778 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 TOM1L1O75674 476 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 GJB5O95377 273 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 MYBP10242 640 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 CASP5P51878 434 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 STK4Q13043 487 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 EEF1DP3Q658K8 133 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 GLIS3Q8NEA6 775 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 GPT2Q8TD30 523 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 PGBD4Q96DM1 585 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 ADPGKQ9BRR6 497 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
HSPG2-202ENST00000374676 CLSTN2Q9H4D0 955 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 TMEM206Q9H813 350 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 SLC39A2Q9NP94 309 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 LRFN2Q9ULH4 789 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 PCDHB7Q9Y5E2 793 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 TRIP11Q15643 1979 aa12.46□□□□□ -0.41
HSPG2-202ENST00000374676 FNDC1Q4ZHG4 1894 aaPredicted RBP12.46□□□□□ -0.42
HSPG2-202ENST00000374676 GBF1Q92538 1859 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 HOXA2O43364 376 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 NPTXRO95502 500 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 MCF2P10911 925 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 ATF7P17544 494 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 PTMSP20962 102 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 LIG4P49917 911 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 KCNA1Q09470 495 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 MPZL3Q6UWV2 235 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 CDR2LQ86X02 465 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 KIAA0895Q8NCT3 520 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 SMG8Q8ND04 991 aaKnown RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 RSPH1Q8WYR4 309 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 BICD1Q96G01 975 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 ZBTB45Q96K62 511 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-202ENST00000374676 RAD9AQ99638 391 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 TCHPQ9BT92 498 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 UBN1Q9NPG3 1134 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 IPPQ9Y573 584 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 CITO14578 2027 aa12.45□□□□□ -0.42
HSPG2-202ENST00000374676 CLDN3O15551 220 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 DGKIO75912 1065 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 UPP2O95045 317 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 KIF20AO95235 890 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 HOXD13P35453 343 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 SMAD3P84022 425 aaKnown RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 MCL1Q07820 350 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 FAM109BQ6ICB4 259 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 SLFN12LQ6IEE8 588 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 SLC39A4Q6P5W5 647 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 SYCP3Q8IZU3 236 aa12.44□□□□□ -0.42
HSPG2-202ENST00000374676 ERCC4Q92889 916 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 ZNF689Q96CS4 500 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-202ENST00000374676 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms