RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
HSPG2-201ENST00000374673 TNFSF13BQ9Y275 285 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 UBE4BO95155 1302 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 EIF3DO15371 548 aaKnown RBP eCLIP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 ZNF623O75123 536 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 L1TD1Q5T7N2 865 aaKnown RBP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 EPM2AIP1Q7L775 607 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 TMEM161AQ9NX61 479 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 USP20Q9Y2K6 914 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 PCDHA5Q9Y5H7 936 aa16.48■□□□□ 0.23
HSPG2-201ENST00000374673 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
HSPG2-201ENST00000374673 ABLIM1O14639 778 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 TOM1L1O75674 476 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 SMC2O95347 1197 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 EOMESO95936 686 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 MBD3O95983 291 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 STAG3L1P0CL83 205 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 PROZP22891 400 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 EEF1DP3Q658K8 133 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 ZNF598Q86UK7 904 aaKnown RBP16.47■□□□□ 0.23
HSPG2-201ENST00000374673 CDR2LQ86X02 465 aaPredicted RBP16.47■□□□□ 0.23
HSPG2-201ENST00000374673 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 GLIS3Q8NEA6 775 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 ZNF507Q8TCN5 953 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 ACCSQ96QU6 501 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 ADPGKQ9BRR6 497 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 EIF2AQ9BY44 585 aaKnown RBP16.47■□□□□ 0.23
HSPG2-201ENST00000374673 CLSTN2Q9H4D0 955 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 EXOC7Q9UPT5 735 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
HSPG2-201ENST00000374673 COL4A6Q14031 1691 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 HNRNPDLO14979 420 aaKnown RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 PRPF6O94906 941 aaKnown RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 GJB5O95377 273 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 NPTXRO95502 500 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 ATF7P17544 494 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 LIG4P49917 911 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 KCNA1Q09470 495 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 STK4Q13043 487 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 BMT2Q1RMZ1 405 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 DCAF4L1Q3SXM0 396 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 HERC6Q8IVU3 1022 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 SMG8Q8ND04 991 aaKnown RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 BICD1Q96G01 975 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 TRIM6Q9C030 488 aaPredicted RBP16.46■□□□□ 0.23
HSPG2-201ENST00000374673 TMEM206Q9H813 350 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 LRFN2Q9ULH4 789 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 IPPQ9Y573 584 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 PCDHB7Q9Y5E2 793 aa16.46■□□□□ 0.23
HSPG2-201ENST00000374673 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-201ENST00000374673 LRIT3Q3SXY7 679 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 FAM109BQ6ICB4 259 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-201ENST00000374673 SLC39A4Q6P5W5 647 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
HSPG2-201ENST00000374673 PGBD4Q96DM1 585 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 CDT1Q9H211 546 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 RC3H2Q9HBD1 1191 aaKnown RBP16.45■□□□□ 0.22
HSPG2-201ENST00000374673 STYXL1Q9Y6J8 313 aa16.45■□□□□ 0.22
HSPG2-201ENST00000374673 ZMYM2Q9UBW7 1377 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 HOXA2O43364 376 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 DGKIO75912 1065 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 UPP2O95045 317 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 MCF2P10911 925 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 PTMSP20962 102 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 MCL1Q07820 350 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 NOLC1Q14978 699 aaKnown RBP eCLIP16.44■□□□□ 0.22
HSPG2-201ENST00000374673 CAMK4Q16566 473 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-201ENST00000374673 HACE1Q8IYU2 909 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 ZNF689Q96CS4 500 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-201ENST00000374673 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
HSPG2-201ENST00000374673 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
HSPG2-201ENST00000374673 RNF19AQ9NV58 838 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 ANKFY1Q9P2R3 1169 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 RALGAPA2Q2PPJ7 1873 aa16.44■□□□□ 0.22
HSPG2-201ENST00000374673 CITO14578 2027 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 GRXCR1A8MXD5 290 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 ANKRD63C9JTQ0 380 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 CLDN3O15551 220 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms