RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SAR1BQ9Y6B6 198 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 KIAA0391O15091 583 aaKnown RBP27.11■■□□□ 1.93
CTSA-203ENST00000372459 GAS2O43903 313 aaKnown RBP27.11■■□□□ 1.93
CTSA-203ENST00000372459 EVI5O60447 810 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 MOCS3O95396 460 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 PIGRP01833 764 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 CYP24A1Q07973 514 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 TRIM50Q86XT4 487 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 GOLGA1Q92805 767 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 GPR88Q9GZN0 384 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 SMARCAD1Q9H4L7 1026 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 TMEM134Q9H6X4 195 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 JRKLQ9Y4A0 524 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 CAPN6Q9Y6Q1 641 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 PLXNA1Q9UIW2 1896 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 H2AFXP16104 143 aaPredicted RBP27.1■■□□□ 1.93
CTSA-203ENST00000372459 KRT39Q6A163 491 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 NOX5Q96PH1 765 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 TMEM8AQ9HCN3 771 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 VTA1Q9NP79 307 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 USP20Q9Y2K6 914 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 STYXL1Q9Y6J8 313 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 SIP14410 1827 aa27.1■■□□□ 1.93
CTSA-203ENST00000372459 LRRIQ3A6PVS8 624 aaPredicted RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 PNMA6AP0CW24 399 aaPredicted RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 GTF2H1P32780 548 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 CHMP4BP1P59074 171 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 CAPSQ13938 189 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 BMS1Q14692 1282 aaKnown RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 PLCB4Q15147 1175 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 KIAA0753Q2KHM9 967 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 IER5Q5VY09 327 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 RSRC2Q7L4I2 434 aaKnown RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 ZNF467Q7Z7K2 595 aaPredicted RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 TCP11Q8WWU5 503 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 ZNF233A6NK53 670 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 EXTL3O43909 919 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 NAB2Q15742 525 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 SLFN12LQ6IEE8 588 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 FAM213AQ9BRX8 229 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 UBE2TQ9NPD8 197 aaPredicted RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 HDAC6Q9UBN7 1215 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 PUF60Q9UHX1 559 aaKnown RBP27.09■■□□□ 1.93
CTSA-203ENST00000372459 NAGPAQ9UK23 515 aa27.09■■□□□ 1.93
CTSA-203ENST00000372459 ADCY3O60266 1144 aa27.08■■□□□ 1.93
CTSA-203ENST00000372459 ARHGAP44Q17R89 818 aa27.08■■□□□ 1.93
CTSA-203ENST00000372459 SALL4Q9UJQ4 1053 aa27.08■■□□□ 1.93
CTSA-203ENST00000372459 TULP1O00294 542 aaPredicted RBP27.08■■□□□ 1.92
CTSA-203ENST00000372459 MAP2K1Q02750 393 aaPredicted RBP27.08■■□□□ 1.92
CTSA-203ENST00000372459 TEX35Q5T0J7 233 aa27.08■■□□□ 1.92
CTSA-203ENST00000372459 TAPT1Q6NXT6 567 aa27.08■■□□□ 1.92
CTSA-203ENST00000372459 ALKBH5Q6P6C2 394 aaKnown RBP27.08■■□□□ 1.92
CTSA-203ENST00000372459 JPH2Q9BR39 696 aaPredicted RBP27.08■■□□□ 1.92
CTSA-203ENST00000372459 FAM53CQ9NYF3 392 aa27.08■■□□□ 1.92
CTSA-203ENST00000372459 COQ4Q9Y3A0 265 aa27.08■■□□□ 1.92
CTSA-203ENST00000372459 ATP8B3O60423 1300 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 NAP1L1P55209 391 aaKnown RBP27.07■■□□□ 1.92
CTSA-203ENST00000372459 TUBB4BP68371 445 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 LAMC2Q13753 1193 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 TMEM63BQ5T3F8 832 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 GPR142Q7Z601 462 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 ARHGEF19Q8IW93 802 aa27.07■■□□□ 1.92
CTSA-203ENST00000372459 PRPF31Q8WWY3 499 aaKnown RBP27.07■■□□□ 1.92
CTSA-203ENST00000372459 BTNL10A8MVZ5 291 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 ZBTB42B2RXF5 422 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 DRP2Q13474 957 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 MXD4Q14582 209 aaPredicted RBP27.06■■□□□ 1.92
CTSA-203ENST00000372459 FAM110CQ1W6H9 321 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 PSPC1Q8WXF1 523 aaKnown RBP27.06■■□□□ 1.92
CTSA-203ENST00000372459 POP1Q99575 1024 aaKnown RBP27.06■■□□□ 1.92
CTSA-203ENST00000372459 PTPN18Q99952 460 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 SUGCTQ9HAC7 445 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 PRDM4Q9UKN5 801 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 AGO2Q9UKV8 859 aaKnown RBP27.06■■□□□ 1.92
CTSA-203ENST00000372459 NENFQ9UMX5 172 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 TRPC6Q9Y210 931 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 IGKV6-21A0A0C4DH24 114 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 CTAGE15A4D2H0 777 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 HBP1O60381 514 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 CTAGE8P0CG41 777 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 KLRC1P26715 233 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 EFNA5P52803 228 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 ARHGAP1Q07960 439 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 CTAGE6Q86UF2 777 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 CTAGE4Q8IX94 777 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 RABGGTAQ92696 567 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 PACSIN1Q9BY11 444 aa27.06■■□□□ 1.92
CTSA-203ENST00000372459 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.06■■□□□ 1.92
CTSA-203ENST00000372459 RBM47A0AV96 593 aaKnown RBP27.05■■□□□ 1.92
CTSA-203ENST00000372459 FOXN3O00409 490 aaPredicted RBP27.05■■□□□ 1.92
CTSA-203ENST00000372459 DDX3XO00571 662 aaKnown RBP eCLIP27.05■■□□□ 1.922e-7■■■■■ 33.6
CTSA-203ENST00000372459 BUB1O43683 1085 aa27.05■■□□□ 1.92
CTSA-203ENST00000372459 LDHAP00338 332 aaKnown RBP27.05■■□□□ 1.92
CTSA-203ENST00000372459 GH1P01241 217 aa27.05■■□□□ 1.92
CTSA-203ENST00000372459 DLATP10515 647 aaKnown RBP27.05■■□□□ 1.92
CTSA-203ENST00000372459 DPP9Q86TI2 863 aa27.05■■□□□ 1.92
CTSA-203ENST00000372459 KRT222Q8N1A0 295 aa27.05■■□□□ 1.92
CTSA-203ENST00000372459 LRRN2O75325 713 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 GPC3P51654 580 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 GRB14Q14449 540 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms