RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 HOXD13P35453 343 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 UBXN11Q5T124 520 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 NELFCDQ8IXH7 590 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 RNPC3Q96LT9 517 aaKnown RBP17.91■□□□□ 0.46
TMEM53-203ENST00000372242 ACCSQ96QU6 501 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 RMND1Q9NWS8 449 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 MAN1B1Q9UKM7 699 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 C9IYK1 514 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 ALCAMQ13740 583 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 NFKBIBQ15653 356 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 SLC27A1Q6PCB7 646 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 STXBP4Q6ZWJ1 553 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 SLC24A5Q71RS6 500 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 MYOCDQ8IZQ8 938 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 HVCN1Q96D96 273 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 ANKFY1Q9P2R3 1169 aa17.91■□□□□ 0.46
TMEM53-203ENST00000372242 ANKRD63C9JTQ0 380 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 EIF3DO15371 548 aaKnown RBP eCLIP17.9■□□□□ 0.46
TMEM53-203ENST00000372242 UPP2O95045 317 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 NPTXRO95502 500 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 ABCD1P33897 745 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 BMP8BP34820 402 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 KCNJ6P48051 423 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 LIG4P49917 911 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 SLC39A4Q6P5W5 647 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 ZBTB33Q86T24 672 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 SYCP3Q8IZU3 236 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 ZNF507Q8TCN5 953 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 TCHPQ9BT92 498 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 FAM105AQ9NUU6 356 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 TMEM63CQ9P1W3 806 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 TNFSF13BQ9Y275 285 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 SLC4A7Q9Y6M7 1214 aa17.9■□□□□ 0.46
TMEM53-203ENST00000372242 A0A0U1RQF3 1178 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 N4BP3O15049 544 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 EFCAB14O75071 495 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 BMP6P22004 513 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 CAVIN1Q6NZI2 390 aaKnown RBP17.89■□□□□ 0.45
TMEM53-203ENST00000372242 FAM117BQ6P1L5 589 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 RNF169Q8NCN4 708 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 PRO3102Q9H379 93 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 PTPRHQ9HD43 1115 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 C1orf112Q9NSG2 853 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 HES2Q9Y543 173 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 PCDHB2Q9Y5E7 798 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 ZMYM2Q9UBW7 1377 aa17.89■□□□□ 0.45
TMEM53-203ENST00000372242 ABLIM1O14639 778 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TOM1L1O75674 476 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 PIGRP01833 764 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 AMHP03971 560 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 HARSP12081 509 aaKnown RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 PTMSP20962 102 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 PROZP22891 400 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 ZNF568Q3ZCX4 644 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 ZNF658Q5TYW1 1059 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 ECHDC2Q86YB7 292 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TRIM6Q9C030 488 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 HAPLN2Q9GZV7 340 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 EXOC7Q9UPT5 735 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 PTPRSQ13332 1948 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 ATF7P17544 494 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 MATR3P43243 847 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 FAM189BP81408 668 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 FAM109BQ6ICB4 259 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 MPZL3Q6UWV2 235 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 SMG8Q8ND04 991 aaKnown RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 LPPQ93052 612 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 CCDC51Q96ER9 411 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 ADPGKQ9BRR6 497 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TRAIPQ9BWF2 469 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 CDT1Q9H211 546 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 NXF3Q9H4D5 531 aaKnown RBP17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TMEM206Q9H813 350 aa17.88■□□□□ 0.45
TMEM53-203ENST00000372242 TTC3P53804 2025 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 CLDN3O15551 220 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 TGFB1I1O43294 461 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 PRCPP42785 496 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 MORC3Q14149 939 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 KNOP1Q1ED39 458 aaKnown RBP17.87■□□□□ 0.45
TMEM53-203ENST00000372242 BMT2Q1RMZ1 405 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 CRIPAKQ8N1N5 446 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 CEP120Q8N960 986 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 TOP1MTQ969P6 601 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 APOL6Q9BWW8 343 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-203ENST00000372242 IPPQ9Y573 584 aa17.87■□□□□ 0.45
TMEM53-203ENST00000372242 GRXCR1A8MXD5 290 aa17.86■□□□□ 0.45
TMEM53-203ENST00000372242 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
TMEM53-203ENST00000372242 ADSSP30520 456 aa17.86■□□□□ 0.45
TMEM53-203ENST00000372242 OSTNP61366 133 aa17.86■□□□□ 0.45
TMEM53-203ENST00000372242 SEZ6Q53EL9 994 aa17.86■□□□□ 0.45
TMEM53-203ENST00000372242 PRPF38BQ5VTL8 546 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms