RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TDP2O95551 362 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 CYP3A4P08684 503 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM86B2P0C5J1 330 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 AKR1A1P14550 325 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SMPD1P17405 629 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 USP11P51784 963 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 EHHADHQ08426 723 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 MTMR1Q13613 665 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SKIDA1Q1XH10 827 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 CEP55Q53EZ4 464 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 LACTB2Q53H82 288 aaPredicted RBP12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 PRR16Q569H4 304 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 IQSEC1Q6DN90 963 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 LRRC55Q6ZSA7 311 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 USP38Q8NB14 1042 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 ACTRT1Q8TDG2 376 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 CASKIN2Q8WXE0 1202 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 COPS5Q92905 334 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 AIPL1Q9NZN9 384 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 SALL4Q9UJQ4 1053 aa12.41□□□□□ -0.42
TSPAN1-201ENST00000372003 GMNCA6NCL1 334 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 EPHB6O15197 1021 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 CCNT1O60563 726 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 PALMO75781 387 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 MYZAPP0CAP1 466 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 ARP10275 920 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 GHRP10912 638 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 CXCR5P32302 372 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 ATP1A2P50993 1020 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 CDR1P51861 262 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 NEDD9Q14511 834 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 PDIA5Q14554 519 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 TTLL4Q14679 1199 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 WLSQ5T9L3 541 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 SH2D3CQ8N5H7 860 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 TAF4BQ92750 862 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 MMTAG2Q9BU76 263 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 KLC4Q9NSK0 619 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 ZNFX1Q9P2E3 1918 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 BZW2Q9Y6E2 419 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 RBM47A0AV96 593 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 MEIS1O00470 390 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 NCK2O43639 380 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 ATP9AO75110 1047 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 RARBP10826 455 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 SP2Q02086 613 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 GUCY1A3Q02108 690 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 KCNMA1Q12791 1236 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 CCDC121Q6ZUS5 278 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 LARP4BQ92615 738 aaKnown RBP12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 BCAS3Q9H6U6 928 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 KCNH7Q9NS40 1196 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 DONSONQ9NYP3 566 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 PLAAQ9Y263 795 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 COL4A3BPQ9Y5P4 624 aa12.4□□□□□ -0.42
TSPAN1-201ENST00000372003 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 H0YGN5 161 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 TULP1O00294 542 aaPredicted RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 TRAPPC3O43617 180 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 PGK1P00558 417 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CIITAP33076 1130 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 GRB10Q13322 594 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 TDRD12Q587J7 1177 aaKnown RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CEP85LQ5SZL2 805 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 LHX8Q68G74 356 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 TTC19Q6DKK2 380 aaPredicted RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CCDC13Q8IYE1 715 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 IFT81Q8WYA0 676 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 GJA10Q969M2 543 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CENPTQ96BT3 561 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 ABHD8Q96I13 439 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 KRT12Q99456 494 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 PLIN2Q99541 437 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms