RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 EVPLQ92817 2033 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 SPC25Q9HBM1 224 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 SETD4Q9NVD3 440 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 KAT6AQ92794 2004 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 HAS3O00219 553 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 GNRH1P01148 92 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 HNRNPH3P31942 346 aaKnown RBP28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 PSEN2P49810 448 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 GJA9P57773 515 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 FAM213AQ9BRX8 229 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 FZD8Q9H461 694 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 PLAGL2Q9UPG8 496 aa28.62■■■□□ 2.17
ATPAF1-202ENST00000371937 A0A0B4J269 797 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 SOWAHDA6NJG2 315 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 ACKR2O00590 384 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 TOM1L1O75674 476 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 SLC9A1P19634 815 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 MATR3P43243 847 aaKnown RBP eCLIP28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 CHMP4BP1P59074 171 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 MYL7Q01449 175 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 CAP1Q01518 475 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 NFRKBQ6P4R8 1299 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 RRAGAQ7L523 313 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 IFNLR1Q8IU57 520 aaPredicted RBP28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 LMBR1Q8WVP7 490 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 BAP1Q92560 729 aa28.61■■■□□ 2.17
ATPAF1-202ENST00000371937 INO80B-WBP1J3KQ70 363 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CLDN3O15551 220 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 ZSCAN12O43309 604 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 C6orf222P0C671 652 aaPredicted RBP28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 POLR2FP61218 127 aaKnown RBP28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 DLG4P78352 724 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 IRX5P78411 483 aaPredicted RBP28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CDK17Q00537 523 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CYP24A1Q07973 514 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CACNB2Q08289 660 aaPredicted RBP28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CBWD6Q4V339 395 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CBWD3Q5JTY5 395 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CBWD5Q5RIA9 395 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 CD99L2Q8TCZ2 262 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 PARD3BQ8TEW8 1205 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 MSTO1Q9BUK6 570 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 INO80BQ9C086 356 aaPredicted RBP28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 GANQ9H2C0 597 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 ANKFY1Q9P2R3 1169 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 FBXL5Q9UKA1 691 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 USP20Q9Y2K6 914 aa28.6■■■□□ 2.17
ATPAF1-202ENST00000371937 GPR25O00155 361 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 PMM2O15305 246 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 RARBP10826 455 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 CDC42EP1Q00587 391 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 KLHDC7AQ5VTJ3 777 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 WDR59Q6PJI9 974 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 ACO2Q99798 780 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 IFT122Q9HBG6 1241 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 EDN1P05305 212 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 PURAQ00577 322 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 MBTD1Q05BQ5 628 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 PDXDC1Q6P996 788 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 KIAA0319LQ8IZA0 1049 aa28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 SYN2Q92777 582 aaPredicted RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 ZBTB45Q96K62 511 aaPredicted RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 UPF3AQ9H1J1 476 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 PRMT7Q9NVM4 692 aaPredicted RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 TRMT1Q9NXH9 659 aaKnown RBP28.59■■■□□ 2.17
ATPAF1-202ENST00000371937 LRRC53A6NM62 1247 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 ZEB2O60315 1214 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 GTF2H1P32780 548 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 GNASQ5JWF2 1037 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 C1orf220Q5T0J3 134 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 DPY19L2P1Q6NXN4 242 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 RAD9BQ6WBX8 426 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 PLEKHO2Q8TD55 490 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 CCDC127Q96BQ5 260 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 TCHPQ9BT92 498 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 NLRC4Q9NPP4 1024 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 DAAM1Q9Y4D1 1078 aa28.58■■■□□ 2.17
ATPAF1-202ENST00000371937 MBLAC1A4D2B0 266 aaPredicted RBP28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 VTNP04004 478 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 UCHL3P15374 230 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 PPP3CAQ08209 521 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 PRPF4BQ13523 1007 aaKnown RBP28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 ARHGEF6Q15052 776 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 FAM187BQ17R55 369 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 TRIM65Q6PJ69 517 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 TSHZ1Q6ZSZ6 1077 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 ZNF410Q86VK4 478 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 ZNF668Q96K58 619 aaPredicted RBP28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 A0A087WZ62 844 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 USP27XA6NNY8 438 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 ACTN1P12814 892 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 PRKAR2AP13861 404 aaKnown RBP28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 NKX3-2P78367 333 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 TRIM32Q13049 653 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 TOGARAM2Q6ZUX3 1019 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 ERO1AQ96HE7 468 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 CHP1Q99653 195 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 FDXACB1Q9BRP7 624 aaPredicted RBP28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 HAPLN2Q9GZV7 340 aa28.57■■■□□ 2.16
ATPAF1-202ENST00000371937 SMIM35A0A1B0GVV1 85 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms