RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 VPS16Q9H269 839 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 NXF3Q9H4D5 531 aaKnown RBP7.65□□□□□ -1.18
USP1-202ENST00000371146 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 ESYT2A0FGR8 921 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 H0YHG0 523 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 PSMD10O75832 226 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 BRD1O95696 1058 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 AMHP03971 560 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 KCNA5P22460 613 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 CASQ1P31415 396 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 CASP4P49662 377 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 NDUFV1P49821 464 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 SARNPP82979 210 aaKnown RBP7.65□□□□□ -1.18
USP1-202ENST00000371146 PPP2R5AQ15172 486 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 EEF1DP3Q658K8 133 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 ABHD15Q6UXT9 468 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 ANKRD20A12PQ8NF67 263 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 GDPD5Q8WTR4 605 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 MYLIPQ8WY64 445 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 RPGRIP1Q96KN7 1286 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 C16orf70Q9BSU1 422 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 MED10Q9BTT4 135 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 AGXT2Q9BYV1 514 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 IMPG2Q9BZV3 1241 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 RPF1Q9H9Y2 349 aaKnown RBP7.65□□□□□ -1.18
USP1-202ENST00000371146 CLDND1Q9NY35 253 aa7.65□□□□□ -1.18
USP1-202ENST00000371146 GNEQ9Y223 722 aaKnown RBP7.65□□□□□ -1.18
USP1-202ENST00000371146 MROH7Q68CQ1 1323 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 STK36Q9NRP7 1315 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 TRIM49BA6NDI0 452 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 FOSL2P15408 326 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 CIITAP33076 1130 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 BMS1Q14692 1282 aaKnown RBP7.65□□□□□ -1.19
USP1-202ENST00000371146 MAP9Q49MG5 647 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 RINT1Q6NUQ1 792 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 FILIP1Q7Z7B0 1213 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 SNRNP27Q8WVK2 155 aaKnown RBP7.65□□□□□ -1.19
USP1-202ENST00000371146 ARMC5Q96C12 935 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 RNF39Q9H2S5 420 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.65□□□□□ -1.19
USP1-202ENST00000371146 FRMD4BQ9Y2L6 1034 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 TRPV2Q9Y5S1 764 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 AHCTF1Q8WYP5 2266 aa7.65□□□□□ -1.19
USP1-202ENST00000371146 KDM3AQ9Y4C1 1321 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 IGLV3-22A0A075B6J6 115 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 MYMKA6NI61 221 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 KPNA6O60684 536 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TRIM49P0CI25 452 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TRIM49CP0CI26 452 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 LONP1P36776 959 aaKnown RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 NPTX2P47972 431 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 RNASE9P60153 205 aaKnown RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 CUL4AQ13619 759 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ATF7IP2Q5U623 682 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ZNF280DQ6N043 979 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 SHC4Q6S5L8 630 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 URGCPQ8TCY9 931 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TMEM40Q8WWA1 233 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 MINDY3Q9H8M7 445 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PAK6Q9NQU5 681 aaPredicted RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 PDLIM7Q9NR12 457 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PCDHGC5Q9Y5F6 944 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PLIN4Q96Q06 1357 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 STAM2O75886 525 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 IQCF3P0C7M6 154 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 CXCL8P10145 99 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TRAPPC10P48553 1259 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 EPHB4P54760 987 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 SNX17Q15036 470 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ZSCAN26Q16670 478 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ZNF484Q5JVG2 852 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 XRRA1Q6P2D8 792 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 MAMDC4Q6UXC1 1216 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TMC5Q6UXY8 1006 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 OR6B3Q8NGW1 331 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ATL2Q8NHH9 583 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 EIF2AQ9BY44 585 aaKnown RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 PAPPA2Q9BXP8 1791 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 PIK3CDO00329 1044 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PSMA7O14818 248 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 KLRC2P26717 231 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 RPA1P27694 616 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 ATP2C1P98194 919 aaPredicted RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 KRT17Q04695 432 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 BFSP1Q12934 665 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 POSTNQ15063 836 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 SLC17A8Q8NDX2 589 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TTC8Q8TAM2 541 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 GPR152Q8TDT2 470 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 KCNB2Q92953 911 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PCYT2Q99447 389 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PDE11AQ9HCR9 933 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 TYW1Q9NV66 732 aaKnown RBP7.64□□□□□ -1.19
USP1-202ENST00000371146 FAN1Q9Y2M0 1017 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 SNX9Q9Y5X1 595 aa7.64□□□□□ -1.19
USP1-202ENST00000371146 PRRG1O14668 218 aa7.63□□□□□ -1.19
USP1-202ENST00000371146 EPB41L2O43491 1005 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms