RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DPYSL4O14531 572 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 PODNQ7Z5L7 613 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 UBA6A0AVT1 1052 aaPredicted RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 HAUS5O94927 633 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 KRT7P08729 469 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 PPP2R2AP63151 447 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 RBBP7Q16576 425 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 CCDC137Q6PK04 289 aaKnown RBP23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 STAG2Q8N3U4 1231 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 KCNV2Q8TDN2 545 aa23.52■■□□□ 1.36
TM9SF3-201ENST00000371142 GSG1L2A8MUP6 293 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 IFNA8P32881 189 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 BCAR1P56945 870 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 SNF8Q96H20 258 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 ADA2Q9NZK5 511 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 BRAFP15056 766 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 ACAP3Q96P50 834 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 PRDM5Q9NQX1 630 aaPredicted RBP23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 DFFAO00273 331 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 KIF12Q96FN5 646 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 ATXN7L3BQ96GX2 97 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 CHRNA3P32297 505 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 CACNB2Q08289 660 aaPredicted RBP23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 SPON2Q9BUD6 331 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 GCOM2Q9BZD3 368 aaPredicted RBP23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 TAS2R42Q7RTR8 314 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 EIF2AQ9BY44 585 aaKnown RBP23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 ING2Q9H160 280 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 ADAM21Q9UKJ8 722 aa23.51■■□□□ 1.35
TM9SF3-201ENST00000371142 SYCE1LA8MT33 242 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 MYBL1P10243 752 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 RHOT1Q8IXI2 618 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 WNT8AQ9H1J5 351 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 WARS2Q9UGM6 360 aaKnown RBP23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 TEKT2Q9UIF3 430 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 DDX56Q9NY93 547 aaKnown RBP23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 EFTUD2Q15029 972 aaKnown RBP eCLIP23.5■■□□□ 1.354e-7■■■□□ 19.2
TM9SF3-201ENST00000371142 SEL1LQ9UBV2 794 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 AGO2Q9UKV8 859 aaKnown RBP23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 GRID2IPA4D2P6 1211 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 AGR3Q8TD06 166 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 PRAMEP78395 509 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 ARHGEF1Q92888 912 aaKnown RBP23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 ASIC4Q96FT7 647 aa23.5■■□□□ 1.35
TM9SF3-201ENST00000371142 NCAPHQ15003 741 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 SHC4Q6S5L8 630 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 ACAD9Q9H845 621 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 NDFIP2Q9NV92 336 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 CDKL3Q8IVW4 592 aaPredicted RBP23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 ATP1A1P05023 1023 aaKnown RBP23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 TBCCQ15814 346 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 KLHL11Q9NVR0 708 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 CDHR2Q9BYE9 1310 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 IZUMO3Q5VZ72 239 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 NUDCD3Q8IVD9 361 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 OR6P1Q8NGX9 317 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 CYP4F11Q9HBI6 524 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 ADGRG1Q9Y653 693 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 KDM6BO15054 1643 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 AKR1B1P15121 316 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 ARFIP2P53365 341 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 CDH6P55285 790 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 FBXW4P57775 412 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 KDELC2Q7Z4H8 507 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 TAF1DQ9H5J8 278 aaPredicted RBP23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 KIF17Q9P2E2 1029 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 ITM2BQ9Y287 266 aa23.49■■□□□ 1.35
TM9SF3-201ENST00000371142 BRINP3Q76B58 766 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 FAM96AQ9H5X1 160 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 RPAP3Q9H6T3 665 aaPredicted RBP23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 GMNCA6NCL1 334 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 NNMTP40261 264 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 SYCP2LQ5T4T6 812 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 LRRC37BQ96QE4 947 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 TMCC1O94876 653 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 DEUP1Q05D60 604 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 CEP70Q8NHQ1 597 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 GUCY1A2P33402 732 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 GNL1P36915 607 aaPredicted RBP23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 ITPRIPL1Q6GPH6 555 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 LZICQ8WZA0 190 aa23.48■■□□□ 1.35
TM9SF3-201ENST00000371142 CPB1P15086 417 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ZBTB17Q13105 803 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ORC2Q13416 577 aaPredicted RBP23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 FASTKD1Q53R41 847 aaKnown RBP23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 DDIASQ8IXT1 998 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 FAM161BQ96MY7 647 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 PARVAQ9NVD7 372 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 PDHA1P08559 390 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 RFX8Q6ZV50 586 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ECT2Q9H8V3 914 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 SAMD9LQ8IVG5 1584 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 CYP26A1O43174 497 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ATP9BO43861 1147 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ATP5HO75947 161 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ZBTB7AO95365 584 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 CYP19A1P11511 503 aaPredicted RBP23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 NMT1P30419 496 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms