RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TBKBP1A7MCY6 615 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 EOMESO95936 686 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 ATF7P17544 494 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 ABCD1P33897 745 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 FAM189BP81408 668 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 HERC4Q5GLZ8 1057 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 UBXN11Q5T124 520 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 TAS1R3Q7RTX0 852 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 GRAMD1CQ8IYS0 662 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 CRIPAKQ8N1N5 446 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 FIBCD1Q8N539 461 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 LPPQ93052 612 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 APOL6Q9BWW8 343 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 BLZF1Q9H2G9 400 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF576Q9H609 170 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
COL9A1-204ENST00000370496 ANKFY1Q9P2R3 1169 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 IPPQ9Y573 584 aa16.3■□□□□ 0.2
COL9A1-204ENST00000370496 FRMD3A2A2Y4 597 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 LINC01553A4QN01 128 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
COL9A1-204ENST00000370496 NMT1P30419 496 aaKnown RBP16.29■□□□□ 0.2
COL9A1-204ENST00000370496 TAP1Q03518 808 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 COASYQ13057 564 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF568Q3ZCX4 644 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 Q7L0L9 218 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
COL9A1-204ENST00000370496 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF689Q96CS4 500 aaPredicted RBP16.29■□□□□ 0.2
COL9A1-204ENST00000370496 TMEM117Q9H0C3 514 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 TBC1D7Q9P0N9 293 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 MTUS1Q9ULD2 1270 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 INPP5FQ9Y2H2 1132 aa16.29■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF623O75123 536 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 ARHGEF15O94989 841 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 GCNT3O95395 438 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 ITGA4P13612 1032 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 CASP1P29466 404 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 LIG4P49917 911 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 CLLU1OSQ5K130 101 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 TMEM87AQ8NBN3 555 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 PAGE5Q96GU1 130 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 TGS1Q96RS0 853 aaKnown RBP16.28■□□□□ 0.2
COL9A1-204ENST00000370496 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
COL9A1-204ENST00000370496 TTYH1Q9H313 450 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-204ENST00000370496 RSAD1Q9HA92 442 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 OLFML3Q9NRN5 406 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 TBX20Q9UMR3 447 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 HES2Q9Y543 173 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 SZT2Q5T011 3432 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 CDH23Q9H251 3354 aa16.28■□□□□ 0.2
COL9A1-204ENST00000370496 ZNF202O95125 648 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 HARSP12081 509 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 MATR3P43243 847 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 CUL4BQ13620 913 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 ALCAMQ13740 583 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 SPOUT1Q5T280 376 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 CNNM4Q6P4Q7 775 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 STXBP4Q6ZWJ1 553 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 UNC13DQ70J99 1090 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 URGCPQ8TCY9 931 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 HVCN1Q96D96 273 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 FIZ1Q96SL8 496 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 MRPL9Q9BYD2 267 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 CERS4Q9HA82 394 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 RNF19AQ9NV58 838 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 RWDD3Q9Y3V2 267 aa16.27■□□□□ 0.2
COL9A1-204ENST00000370496 MRPL42Q9Y6G3 142 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.2
COL9A1-204ENST00000370496 MEIS3P2A8K0S8 358 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-204ENST00000370496 MYL1P05976 194 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 CTNNB1P35222 781 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 NOLC1Q14978 699 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL9A1-204ENST00000370496 ZC2HC1CQ53FD0 456 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-204ENST00000370496 FAM26FQ5R3K3 315 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 MPZL3Q6UWV2 235 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 ZPBP2Q6X784 338 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 SPRED2Q7Z698 418 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms