RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PHF2O75151 1096 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 KCNA3P22001 575 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CHRNA3P32297 505 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ITGA8P53708 1063 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 RWDD2BP57060 319 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 RCN1Q15293 331 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 GRIK5Q16478 980 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 LACTB2Q53H82 288 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CCDC62Q6P9F0 684 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 RUSC1Q9BVN2 902 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ANAPC7Q9UJX3 599 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC4A7Q9Y6M7 1214 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 MYO3BQ8WXR4 1341 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 PLS3P13797 630 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 MAPK4P31152 587 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CDR2Q01850 454 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 SEPT2Q15019 361 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 LRRC23Q53EV4 343 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 CROCCP2Q86T23 111 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 PPP1R14CQ8TAE6 165 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 C12orf65Q9H3J6 166 aaKnown RBP11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 GGA2Q9UJY4 613 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 KDM3AQ9Y4C1 1321 aa11.14□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 NVLO15381 856 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 SORBS3O60504 671 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 UFL1O94874 794 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 LCA5LO95447 670 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 SKIP12755 728 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 MMP13P45452 471 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PPP2R5EQ16537 467 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 C6orf163Q5TEZ5 329 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 EGFL6Q8IUX8 553 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 CTAGE3PQ8IX95 158 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF34Q8IZ26 560 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ADGRF4Q8IZF3 695 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 TTC17Q96AE7 1141 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 KIAA1683Q9H0B3 1180 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PALM3A6NDB9 673 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ETS2P15036 469 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 CHKAP35790 457 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 GSTO1P78417 241 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 MTDHQ86UE4 582 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 C3orf20Q8ND61 904 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 LNX1Q8TBB1 728 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 MAML1Q92585 1016 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM84AQ96KN4 292 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM161BQ96MY7 647 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 GANQ9H2C0 597 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PFASO15067 1338 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 CAPN9O14815 690 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ESRRAP11474 423 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 GPC5P78333 572 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 GTF2IP78347 998 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 TAF1BQ53T94 588 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 INTS2Q9H0H0 1204 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 MARCOQ9UEW3 520 aaPredicted RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 SYNGAP1Q96PV0 1343 aa11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
PRPF38B-201ENST00000370021 PFDN1O60925 122 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 GSTA1P08263 222 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 TROVE2P10155 538 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 AKR1B1P15121 316 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 USP4Q13107 963 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 LAMB3Q13751 1172 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 CATSPER3Q86XQ3 398 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 CYP2W1Q8TAV3 490 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF564Q8TBZ8 553 aaPredicted RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 UCMAQ8WVF2 138 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 KAT5Q92993 513 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 SMYD3Q9H7B4 428 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 RXFP1Q9HBX9 757 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 LOC102724428A0A0B4J2F2 783 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 K7ENM7 598 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 ZBED4O75132 1171 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 PTDSS1P48651 473 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms