RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 P4HBP07237 508 aaKnown RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 XBP1P17861 261 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 AVPR2P30518 371 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 TCF15Q12870 199 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 GIT2Q14161 759 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 AGMOQ6ZNB7 445 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 DENND4AQ7Z401 1863 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 ZNF280BQ86YH2 543 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 TDRD5Q8NAT2 981 aaKnown RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 PRPF31Q8WWY3 499 aaKnown RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 DYDC2Q96IM9 177 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 FAM20AQ96MK3 541 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 FAM193BQ96PV7 902 aaPredicted RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 LXNQ9BS40 222 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 RSAD1Q9HA92 442 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 KCNMB3Q9NPA1 279 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 DZANK1Q9NVP4 752 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 DBR1Q9UK59 544 aaKnown RBP11.56□□□□□ -0.56
CLRN3-201ENST00000368671 SORCS3Q9UPU3 1222 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 STK36Q9NRP7 1315 aa11.56□□□□□ -0.56
CLRN3-201ENST00000368671 CARNS1A5YM72 827 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 ZNF623O75123 536 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 BRD1O95696 1058 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 POMCP01189 267 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 ASGR2P07307 311 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 GCFC2P16383 781 aaKnown RBP11.55□□□□□ -0.56
CLRN3-201ENST00000368671 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
CLRN3-201ENST00000368671 RFC5P40937 340 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
CLRN3-201ENST00000368671 EMC2Q15006 297 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 EPHA7Q15375 998 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 PTPN14Q15678 1187 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 XKR9Q5GH70 373 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 ATAT1Q5SQI0 421 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 UBXN11Q5T124 520 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 PPP4R3AQ6IN85 833 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 KIAA1841Q6NSI8 718 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 TMC5Q6UXY8 1006 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 SRGAP1Q7Z6B7 1085 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 CABP7Q86V35 215 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 C4orf19Q8IY42 314 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 EXOC8Q8IYI6 725 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 FEZF2Q8TBJ5 459 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 TCP11Q8WWU5 503 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 HAS1Q92839 578 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 NAP1L4Q99733 375 aaKnown RBP11.55□□□□□ -0.56
CLRN3-201ENST00000368671 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 DHX33Q9H6R0 707 aaKnown RBP11.55□□□□□ -0.56
CLRN3-201ENST00000368671 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 IRAK3Q9Y616 596 aa11.55□□□□□ -0.56
CLRN3-201ENST00000368671 ZBTB39O15060 712 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 TBX3O15119 743 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 ERLIN2O94905 339 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 BAG4O95429 457 aaKnown RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 KLRC2P26717 231 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 EARS2Q5JPH6 523 aaKnown RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 OTUD6AQ7L8S5 288 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 RNF149Q8NC42 400 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 RNF166Q96A37 237 aaPredicted RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 KLHL5Q96PQ7 755 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 MTRQ99707 1265 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 SFXN1Q9H9B4 322 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
CLRN3-201ENST00000368671 TPCN1Q9ULQ1 816 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 PPME1Q9Y570 386 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 ZNF318Q5VUA4 2279 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 CNTNAP2Q9UHC6 1331 aa11.54□□□□□ -0.56
CLRN3-201ENST00000368671 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
CLRN3-201ENST00000368671 C2CD2LO14523 706 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 NRP1O14786 923 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
CLRN3-201ENST00000368671 PFKFB2O60825 505 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 ALDH2P05091 517 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 ITGA4P13612 1032 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 NCLP19338 710 aaKnown RBP11.53□□□□□ -0.56
CLRN3-201ENST00000368671 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
CLRN3-201ENST00000368671 KRT2P35908 639 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 OR1G1P47890 313 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 NR5A1Q13285 461 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 FERMT3Q86UX7 667 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 SLFN12Q8IYM2 578 aa11.53□□□□□ -0.56
CLRN3-201ENST00000368671 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms