RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CYP2J2P51589 502 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TSHZ1Q6ZSZ6 1077 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 PPP1R16BQ96T49 567 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ACO2Q99798 780 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 XPO4Q9C0E2 1151 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 MINDY3Q9H8M7 445 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 GINS2Q9Y248 185 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 N4BP3O15049 544 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 CLDN3O15551 220 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 DARSP14868 501 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 CDC25BP30305 580 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 COPB1P53618 953 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 MAN2A1Q16706 1144 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 OSMRQ99650 979 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 CELF4Q9BZC1 486 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TNFSF13BQ9Y275 285 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 TISP43B9A030 160 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 MATR3P43243 847 aaKnown RBP eCLIP13.44□□□□□ -0.26
TUBE1-202ENST00000368662 GJA8P48165 433 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 AMHR2Q16671 573 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 INTS8Q75QN2 995 aaKnown RBP13.44□□□□□ -0.26
TUBE1-202ENST00000368662 USP37Q86T82 979 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 TRIM59Q8IWR1 403 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 GPD1LQ8N335 351 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 TCHPQ9BT92 498 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 PCIF1Q9H4Z3 704 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
TUBE1-202ENST00000368662 TRMT13Q9NUP7 481 aaKnown RBP13.44□□□□□ -0.26
TUBE1-202ENST00000368662 TRPV2Q9Y5S1 764 aa13.44□□□□□ -0.26
TUBE1-202ENST00000368662 A0A0B4J269 797 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 IQCF3P0C7M6 154 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 CASP4P49662 377 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 CDK7P50613 346 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 NR1I3Q14994 352 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 SNX17Q15036 470 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 MPZL3Q6UWV2 235 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 APBB1IPQ7Z5R6 666 aaPredicted RBP13.43□□□□□ -0.26
TUBE1-202ENST00000368662 FBXL18Q96ME1 805 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
TUBE1-202ENST00000368662 MSTO1Q9BUK6 570 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 TAB2Q9NYJ8 693 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 ANKFY1Q9P2R3 1169 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 AGO2Q9UKV8 859 aaKnown RBP13.43□□□□□ -0.26
TUBE1-202ENST00000368662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
TUBE1-202ENST00000368662 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 EXTL3O43909 919 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 EDN1P05305 212 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 KRT13P13646 458 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 PROZP22891 400 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 AXLP30530 894 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 ENPEPQ07075 957 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 MCL1Q07820 350 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 SNRNP35Q16560 246 aaKnown RBP13.43□□□□□ -0.26
TUBE1-202ENST00000368662 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 CATSPER4Q7RTX7 472 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 PDLIM2Q96JY6 352 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 TMEM106CQ9BVX2 250 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 VPS16Q9H269 839 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 NDST4Q9H3R1 872 aa13.43□□□□□ -0.26
TUBE1-202ENST00000368662 LGALS16A8MUM7 142 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 PES1O00541 588 aaKnown RBP13.42□□□□□ -0.26
TUBE1-202ENST00000368662 B4GALT4O60513 344 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 TSPAN1O60635 241 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 THPOP40225 353 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 NOLC1Q14978 699 aaKnown RBP eCLIP13.42□□□□□ -0.26
TUBE1-202ENST00000368662 KYAT1Q16773 422 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 VWA3BQ502W6 1294 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 ADPGKQ9BRR6 497 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
TUBE1-202ENST00000368662 PTPRHQ9HD43 1115 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 ZNF233A6NK53 670 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 B4GALT5O43286 388 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
TUBE1-202ENST00000368662 BFSP1Q12934 665 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 ZNF568Q3ZCX4 644 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 C1orf53Q5VUE5 145 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 DRC7Q8IY82 874 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 SAAL1Q96ER3 474 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms