RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HIPK4Q8NE63 616 aa16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
NUCKS1-201ENST00000367142 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 CYP2D6P10635 497 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 LCP1P13796 627 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 FAM102AQ5T9C2 384 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 CYTH2Q99418 400 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 COL15A1P39059 1388 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 KDM5CP41229 1560 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 SLC9A2Q9UBY0 812 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 E9PMD0 336 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 TADA2AO75478 443 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 SLC7A5Q01650 507 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 PKN3Q6P5Z2 889 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 EPM2AIP1Q7L775 607 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 NDE1Q9NXR1 346 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 RBAKQ9NYW8 714 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 APOL1O14791 398 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 HIST1H2AGP0C0S8 130 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 HIST1H2ADP20671 130 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 USP17L6PQ6QN14 398 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 HIST1H2AHQ96KK5 128 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 HIST1H2AJQ99878 128 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 H2AFJQ9BTM1 129 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 SAMD9Q5K651 1589 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 A0A087WUV0 522 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 RNF25Q96BH1 459 aaPredicted RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 PYCARDQ9ULZ3 195 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
NUCKS1-201ENST00000367142 KITP10721 976 aa16.64■□□□□ 0.26
NUCKS1-201ENST00000367142 MMS22LQ6ZRQ5 1243 aa16.64■□□□□ 0.26
NUCKS1-201ENST00000367142 MFAP3LO75121 409 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 SULT1E1P49888 294 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 MAPRE2Q15555 327 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 ZFYVE28Q9HCC9 887 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 PLAAQ9Y263 795 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 AP3B1O00203 1094 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 GYG2O15488 501 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 SERPIND1P05546 499 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 GRM4Q14833 912 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 RESP18Q5W5W9 173 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 PPM1NQ8N819 430 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 LXNQ9BS40 222 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 NRBP1Q9UHY1 535 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 MCAMP43121 646 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 TAF1CQ15572 869 aaPredicted RBP16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 EMBQ6PCB8 327 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 SNX24Q9Y343 169 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 ZFP69BQ9UJL9 534 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 NFU1Q9UMS0 254 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 E2F5Q15329 346 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 FASTKD1Q53R41 847 aaKnown RBP16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 PARK7Q99497 189 aaKnown RBP16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 ELP3Q9H9T3 547 aa16.64■□□□□ 0.25
NUCKS1-201ENST00000367142 PIK3R2O00459 728 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 PSMD3O43242 534 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 TPI1P60174 286 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 SCFD1Q8WVM8 642 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 FAM129AQ9BZQ8 928 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 MINPP1Q9UNW1 487 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 C5orf58C9J3I9 102 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 TXNP10599 105 aaKnown RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 MAP3K10Q02779 954 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 GRIN1Q05586 938 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 DUOXA2Q1HG44 320 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 TBC1D1Q86TI0 1168 aaPredicted RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 APPL2Q8NEU8 664 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 AGO2Q9UKV8 859 aaKnown RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 USP6P35125 1406 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ATP5HO75947 161 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ADCK2Q7Z695 626 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 TMCO5AQ8N6Q1 288 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ABTB1Q969K4 478 aaPredicted RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 YY1AP1Q9H869 796 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 HDLBPQ00341 1268 aaKnown RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 PKP1Q13835 747 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ARMC6Q6NXE6 501 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 RUBCNLQ9H714 662 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 STXBP3O00186 592 aa16.63■□□□□ 0.25
NUCKS1-201ENST00000367142 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 CHRNA3P32297 505 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 RESTQ13127 1097 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 RHOT1Q8IXI2 618 aa16.62■□□□□ 0.25
NUCKS1-201ENST00000367142 STKLD1Q8NE28 680 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms