RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 TCP10L2B9ZVM9 353 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 STXBP3O00186 592 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 COL6A1P12109 1028 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 CCT4P50991 539 aaKnown RBP9.15□□□□□ -0.94
H3F3A-201ENST00000366813 AMPD2Q01433 879 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 MOGSQ13724 837 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 LONRF2Q1L5Z9 754 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 LZTR1Q8N653 840 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 TP53I13Q8NBR0 393 aaPredicted RBP9.15□□□□□ -0.94
H3F3A-201ENST00000366813 WRNIP1Q96S55 665 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 MCMBPQ9BTE3 642 aa9.15□□□□□ -0.94
H3F3A-201ENST00000366813 AARSD1Q9BTE6 412 aaKnown RBP9.15□□□□□ -0.94
H3F3A-201ENST00000366813 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.94
H3F3A-201ENST00000366813 ZNF70Q9UC06 446 aaPredicted RBP9.15□□□□□ -0.94
H3F3A-201ENST00000366813 TCF20Q9UGU0 1960 aaKnown RBP9.14□□□□□ -0.95
H3F3A-201ENST00000366813 FFAR3O14843 346 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 CELA3BP08861 270 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 ATF2P15336 505 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 GRIA2P42262 883 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
H3F3A-201ENST00000366813 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 CC2D1BQ5T0F9 858 aaKnown RBP9.14□□□□□ -0.95
H3F3A-201ENST00000366813 CPNE8Q86YQ8 564 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 RNF38Q9H0F5 515 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 NKX2-4Q9H2Z4 354 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 RXFP1Q9HBX9 757 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 NUDT5Q9UKK9 219 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 BACE2Q9Y5Z0 518 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 PMF1-BGLAPU3KQ54 211 aa9.14□□□□□ -0.95
H3F3A-201ENST00000366813 SMARCA5O60264 1052 aaPredicted RBP9.13□□□□□ -0.95
H3F3A-201ENST00000366813 TNFAIP1Q13829 316 aa9.13□□□□□ -0.95
H3F3A-201ENST00000366813 PARK7Q99497 189 aaKnown RBP9.13□□□□□ -0.95
H3F3A-201ENST00000366813 KRTAP4-11Q9BYQ6 195 aa9.13□□□□□ -0.95
H3F3A-201ENST00000366813 ADAM7Q9H2U9 754 aa9.13□□□□□ -0.95
H3F3A-201ENST00000366813 JAG2Q9Y219 1238 aa9.13□□□□□ -0.95
H3F3A-201ENST00000366813 MGAMO43451 1857 aa9.13□□□□□ -0.95
H3F3A-201ENST00000366813 TRAV20A0A0B4J274 112 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 HMGCRP04035 888 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 U2AF1L5P0DN76 240 aaPredicted RBP9.12□□□□□ -0.95
H3F3A-201ENST00000366813 GLI4P10075 376 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 FGFR1P11362 822 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 PAMP19021 973 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 SLURP1P55000 103 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 U2AF1Q01081 240 aaKnown RBP eCLIP9.12□□□□□ -0.956e-15■■■■□ 20.7
H3F3A-201ENST00000366813 PPATQ06203 517 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 LCE5AQ5TCM9 118 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 YOD1Q5VVQ6 348 aaPredicted RBP9.12□□□□□ -0.95
H3F3A-201ENST00000366813 FOXB2Q5VYV0 432 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 FRMD5Q7Z6J6 570 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 PLBD2Q8NHP8 589 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 FNIP1Q8TF40 1166 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 PEX11GQ96HA9 241 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 CD209Q9NNX6 404 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 DOCK3Q8IZD9 2030 aa9.12□□□□□ -0.95
H3F3A-201ENST00000366813 TRBV23OR9-2A0A075B6M9 112 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 NPHP3-ACAD11A0A0J9YXS1 232 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 ASGR2P07307 311 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 HOXC12P31275 282 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 ZC3H12BQ5HYM0 836 aaKnown RBP9.11□□□□□ -0.95
H3F3A-201ENST00000366813 ZSWIM2Q8NEG5 633 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 COA7Q96BR5 231 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 TMEM260Q9NX78 707 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 ECM29Q5VYK3 1845 aa9.11□□□□□ -0.95
H3F3A-201ENST00000366813 MYO9BQ13459 2157 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 SCG5P05408 212 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 GFRA1P56159 465 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 SF1Q15637 639 aaKnown RBP9.1□□□□□ -0.95
H3F3A-201ENST00000366813 SDE2Q6IQ49 451 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 ADGRG2Q8IZP9 1017 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 COPS5Q92905 334 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 BADQ92934 168 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 IER2Q9BTL4 223 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 SENP6Q9GZR1 1112 aaPredicted RBP9.1□□□□□ -0.95
H3F3A-201ENST00000366813 BCAS3Q9H6U6 928 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 GULP1Q9UBP9 304 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 XIRP2A4UGR9 3374 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 CACNA1GO43497 2377 aa9.1□□□□□ -0.95
H3F3A-201ENST00000366813 ESYT3A0FGR9 886 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 PRODHO43272 600 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 NPHS1O60500 1241 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 PDE8AO60658 829 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 SNRPB2P08579 225 aaKnown RBP9.09□□□□□ -0.95
H3F3A-201ENST00000366813 PABPC1P11940 636 aaKnown RBP9.09□□□□□ -0.95
H3F3A-201ENST00000366813 MC3RP41968 323 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 KCNQ1P51787 676 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 CACNB3P54284 484 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 NHLH1Q02575 133 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 TFF2Q03403 129 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 SCRN1Q12765 414 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 SLC9A5Q14940 896 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 AKNAD1Q5T1N1 836 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 NSMFQ6X4W1 530 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 MIGA2Q7L4E1 593 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms