RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 CHD9Q3L8U1 2897 aa1.72□□□□□ -2.13
RNU1-42P-201ENST00000364033 LCTP09848 1927 aa1.72□□□□□ -2.13
RNU1-42P-201ENST00000364033 DOPEY1Q5JWR5 2465 aa1.72□□□□□ -2.13
RNU1-42P-201ENST00000364033 GREB1LQ9C091 1923 aaPredicted RBP1.72□□□□□ -2.13
RNU1-42P-201ENST00000364033 MYO10Q9HD67 2058 aa1.71□□□□□ -2.13
RNU1-42P-201ENST00000364033 NFASCO94856 1347 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 KDM3AQ9Y4C1 1321 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TECTAO75443 2155 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 C5orf42Q9H799 3197 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 DCDC2BA2VCK2 349 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PRR23AA6NEV1 266 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CASTOR2A6NHX0 329 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM170BA6NMN3 283 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SFI1A8K8P3 1242 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 WDR64B1ANS9 1081 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 BTBD18B2RXH4 712 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 INO80B-WBP1J3KQ70 363 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 WNT7AO00755 349 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 DYNC1I1O14576 645 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CPLX1O14810 134 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 INPPL1O15357 1258 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TEX28O15482 410 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TGM5O43548 720 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GALR2O43603 387 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NRDCO43847 1150 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF500O60304 480 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NEMFO60524 1076 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCNT1O60563 726 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PSMD10O75832 226 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 KRT38O76015 456 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ERLIN2O94905 339 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLITRK3O94933 977 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NPTXRO95502 500 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 EOMESO95936 686 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TUBB4AP04350 444 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CYP3A4P08684 503 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 HMGB1P09429 215 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SP9P0CG40 484 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SRGAP2BP0DMP2 458 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCDC192P0DO97 292 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CTSAP10619 480 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 HARSP12081 509 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GLULP15104 373 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GJA1P17302 382 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 RPS6KB1P23443 525 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GNA11P29992 359 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CDC25AP30304 524 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 HOXA11P31270 313 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CIITAP33076 1130 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 DDIT3P35638 169 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 MLH1P40692 756 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TXKP42681 527 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 MTHFRP42898 656 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PHKA2P46019 1235 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 BRCC3P46736 316 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 QARSP47897 775 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC26A2P50443 739 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 DNM2P50570 870 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SCNN1GP51170 649 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CLCN4P51793 760 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 POLGP54098 1239 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PSMC5P62195 406 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CSTF1Q05048 431 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 UBE3AQ05086 875 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ITIH3Q06033 890 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SPAG1Q07617 926 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 LAMTOR4Q0VGL1 99 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SCRN1Q12765 414 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SRSF5Q13243 272 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NR5A1Q13285 461 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 AP3B2Q13367 1082 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TDGQ13569 410 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 MTMR3Q13615 1198 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TOB2Q14106 344 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GRM2Q14416 872 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 KRT32Q14532 448 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 BMS1Q14692 1282 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NOLC1Q14978 699 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 UBXN2BQ14CS0 331 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ANGPT1Q15389 498 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 TARBP2Q15633 366 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PTPN14Q15678 1187 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCDC6Q16204 474 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 NTRK3Q16288 839 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 RSPO4Q2I0M5 234 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZSCAN23Q3MJ62 389 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SEZ6Q53EL9 994 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC44A4Q53GD3 710 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 XKR3Q5GH77 459 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 GLRA4Q5JXX5 417 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ODR4Q5SWX8 454 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM171A1Q5VUB5 890 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CWF19L1Q69YN2 538 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 HEATR6Q6AI08 1181 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ATL3Q6DD88 541 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ASTLQ6HA08 431 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PDE12Q6L8Q7 609 aaKnown RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF746Q6NUN9 644 aaPredicted RBP1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 PPP1R18Q6NYC8 613 aa1.71□□□□□ -2.14
RNU1-42P-201ENST00000364033 CAVIN1Q6NZI2 390 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms