RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SYT2Q8N9I0 419 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 CPA5Q8WXQ8 436 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 UBOX5O94941 541 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PPP2R5CQ13362 524 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PDIK1LQ8N165 341 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 DAGLBQ8NCG7 672 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 ELMO3Q96BJ8 720 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 TTC1Q99614 292 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 WNT8AQ9H1J5 351 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 COMMD10Q9Y6G5 202 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 AGPSO00116 658 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 TMEM191BP0C7N4 346 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PDIA2Q13087 525 aaKnown RBP14.84□□□□□ -0.03
COL6A1-201ENST00000361866 SALL4Q9UJQ4 1053 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
COL6A1-201ENST00000361866 DKC1O60832 514 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL6A1-201ENST00000361866 RPS6KA5O75582 802 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 DCTN3O75935 186 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 ANP32DO95626 131 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 TMEM253P0C7T8 217 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 INTS5Q6P9B9 1019 aaKnown RBP14.83□□□□□ -0.04
COL6A1-201ENST00000361866 FBXO41Q8TF61 875 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 SNF8Q96H20 258 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 RBM15Q96T37 977 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL6A1-201ENST00000361866 RUSC1Q9BVN2 902 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 CARD9Q9H257 536 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 DENND3A2RUS2 1198 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 F8VZ95 297 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 RXRBP28702 533 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 FUT2Q10981 343 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 HAUS6Q7Z4H7 955 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.04
COL6A1-201ENST00000361866 TOM1L1O75674 476 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 CRKP46108 304 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 SKOR1P84550 965 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 CDR2Q01850 454 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 TMEM179Q6ZVK1 233 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 ZBTB33Q86T24 672 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 ARMC2Q8NEN0 867 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 VTI1AQ96AJ9 217 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 STAMBPL1Q96FJ0 436 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 CFAP36Q96G28 342 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 TRIM55Q9BYV6 548 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 GEMIN8Q9NWZ8 242 aaKnown RBP14.83□□□□□ -0.04
COL6A1-201ENST00000361866 PCSK1NQ9UHG2 260 aa14.83□□□□□ -0.04
COL6A1-201ENST00000361866 AFF2P51816 1311 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 NOP56O00567 594 aaKnown RBP14.82□□□□□ -0.04
COL6A1-201ENST00000361866 MIPOL1Q8TD10 442 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 ATP2A3Q93084 1043 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 ANKRD26Q9UPS8 1709 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 OPLAHO14841 1288 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 PDE1BQ01064 536 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 GEN1Q17RS7 908 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 NXNQ6DKJ4 435 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 AADACL2Q6P093 401 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 SLC4A9Q96Q91 983 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 ADAMTS3O15072 1205 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 RPA1P27694 616 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 KCNA1Q09470 495 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 KCNMA1Q12791 1236 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 CDO1Q16878 200 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 ANKRD20A8PQ5CZ79 823 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 PPP1R18Q6NYC8 613 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 TMC3Q7Z5M5 1100 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 FUKQ8N0W3 1084 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 ACTRT1Q8TDG2 376 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 TMEM117Q9H0C3 514 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 TRABDQ9H4I3 376 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 NPHS2Q9NP85 383 aa14.82□□□□□ -0.04
COL6A1-201ENST00000361866 CDH16O75309 829 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 RAD17O75943 681 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 ITGA8P53708 1063 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 TMPRSS15P98073 1019 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 EAPPQ56P03 285 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 MDH1BQ5I0G3 518 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 KRT39Q6A163 491 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 DARS2Q6PI48 645 aaKnown RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SLC17A8Q8NDX2 589 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 PI4K2AQ9BTU6 479 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SMYD3Q9H7B4 428 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 IFT172Q9UG01 1749 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 RTN2O75298 545 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 POLR2BP30876 1174 aaKnown RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 NT5C2P49902 561 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 ARSEP51690 589 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SUGP1Q8IWZ8 645 aaKnown RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 NLGN1Q8N2Q7 840 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SLC20A1Q8WUM9 679 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 TRIM11Q96F44 468 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 GJA3Q9Y6H8 435 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 MAP3K7O43318 606 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 HAUS5O94927 633 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms