RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 OLFML2BQ68BL8 750 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
VAMP1-201ENST00000361716 LRRC55Q6ZSA7 311 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 SCG3Q8WXD2 468 aaKnown RBP13.6□□□□□ -0.23
VAMP1-201ENST00000361716 CASP4P49662 377 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 SLC5A9Q2M3M2 681 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 NT5DC3Q86UY8 548 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 UTP4Q969X6 686 aaKnown RBP13.6□□□□□ -0.23
VAMP1-201ENST00000361716 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 CFAP69A5D8W1 941 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 RIPK2O43353 540 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 KRT36O76013 467 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 KRT15P19012 456 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 NFIXQ14938 502 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 PRUNE1Q86TP1 453 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-201ENST00000361716 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
VAMP1-201ENST00000361716 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 USP17L10C9JJH3 530 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 LAD1O00515 517 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TXNDC9O14530 226 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 LIN7AO14910 233 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 SPOPO43791 374 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 LDHCP07864 332 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TRIM49P0CI25 452 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TRIM49CP0CI26 452 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 ALADP13716 330 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 RASA1P20936 1047 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 CPA2P48052 419 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 OVGP1Q12889 678 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 CTTNQ14247 550 aaKnown RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 COL23A1Q86Y22 540 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TPH2Q8IWU9 490 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 C9orf72Q96LT7 481 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 NDNQ99608 321 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 KCNMB3Q9NPA1 279 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 ANKRD63C9JTQ0 380 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 HOXA13P31271 388 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 C4orf33Q8N1A6 199 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TAB3Q8N5C8 712 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
VAMP1-201ENST00000361716 TTC1Q99614 292 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 BHMT2Q9H2M3 363 aa13.59□□□□□ -0.23
VAMP1-201ENST00000361716 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.58□□□□□ -0.23
VAMP1-201ENST00000361716 A0A0G2JND7 137 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 RASA4BC9J798 803 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 RASA4O43374 803 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 STAT1P42224 750 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 GTF2IP78347 998 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 MGAT5Q09328 741 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 KCNA1Q09470 495 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 MAPK7Q13164 816 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 TMED1Q13445 227 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 KHDC1Q4VXA5 237 aaKnown RBP13.58□□□□□ -0.23
VAMP1-201ENST00000361716 NSMFQ6X4W1 530 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 FAM210AQ96ND0 272 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 CDC42EP4Q9H3Q1 356 aaKnown RBP13.58□□□□□ -0.23
VAMP1-201ENST00000361716 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 FLT1P17948 1338 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 RPTORQ8N122 1335 aa13.58□□□□□ -0.23
VAMP1-201ENST00000361716 ATRNO75882 1429 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 KIAA0391O15091 583 aaKnown RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 MAPK13O15264 365 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 CCNFP41002 786 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 CASP5P51878 434 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 CDR2Q01850 454 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 SEL1L2Q5TEA6 688 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 LRRC57Q8N9N7 239 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 PREBQ9HCU5 417 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 NPHS2Q9NP85 383 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 RPS6KL1Q9Y6S9 549 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 FAM13AO94988 1023 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 IL9RQ01113 521 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 KLRC3Q07444 240 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 MCL1Q07820 350 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 MPP2Q14168 576 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 TAF1BQ53T94 588 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-201ENST00000361716 DUPD1Q68J44 220 aa13.58□□□□□ -0.24
VAMP1-201ENST00000361716 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms