RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TBC1D10BQ4KMP7 808 aaPredicted RBP16.02■□□□□ 0.15
UBAP1-202ENST00000359544 TMEM154Q6P9G4 183 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 DLK2Q6UY11 383 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 FAM43BQ6ZT52 329 aaPredicted RBP16.02■□□□□ 0.15
UBAP1-202ENST00000359544 TRMT10CQ7L0Y3 403 aaKnown RBP16.02■□□□□ 0.15
UBAP1-202ENST00000359544 DNAAF5Q86Y56 855 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 CFAP61Q8NHU2 1237 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 UHMK1Q8TAS1 419 aaKnown RBP16.02■□□□□ 0.15
UBAP1-202ENST00000359544 INPP5DQ92835 1189 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.15
UBAP1-202ENST00000359544 COA1Q9GZY4 146 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 KANSL2Q9H9L4 492 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 GPRC5DQ9NZD1 345 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.15
UBAP1-202ENST00000359544 EIF4E1BA6NMX2 242 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 LMNAP02545 664 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 PDHA1P08559 390 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 SLC9A1P19634 815 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 PTGIRP43119 386 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 RPL21P46778 160 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 TFAP4Q01664 338 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 WASHC2DQ5SRD0 308 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 PODNQ7Z5L7 613 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 NELFCDQ8IXH7 590 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 ASAP3Q8TDY4 903 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 UTP4Q969X6 686 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 BICD1Q96G01 975 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 RPL26L1Q9UNX3 145 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 DDX3XO00571 662 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 MTFR1Q15390 333 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 IRGCQ6NXR0 463 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 MAEAQ7L5Y9 396 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 FRMD5Q7Z6J6 570 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 RPUSD2Q8IZ73 545 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 DNAJC9Q8WXX5 260 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 MAGEB18Q96M61 343 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 TRAPPC9Q96Q05 1148 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 CTTNBP2NLQ9P2B4 639 aa16.01■□□□□ 0.15
UBAP1-202ENST00000359544 ARMCX3Q9UH62 379 aaPredicted RBP16.01■□□□□ 0.15
UBAP1-202ENST00000359544 WDR90Q96KV7 1748 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 POTEFA5A3E0 1075 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 EYA4O95677 639 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 SP100P23497 879 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 PON1P27169 355 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 C1QTNF8P60827 252 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 EVX2Q03828 476 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 PPATQ06203 517 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 POTEEQ6S8J3 1075 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 VSTM1Q6UX27 236 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 SLC35G2Q8TBE7 412 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 CTNNBL1Q8WYA6 563 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 NUDCD1Q96RS6 583 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 SYT15Q9BQS2 421 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 SPZ1Q9BXG8 430 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 KCTD10Q9H3F6 313 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 KCNK9Q9NPC2 374 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 ASTN2O75129 1339 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 TOMM70O94826 608 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 GGPS1O95749 300 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 GSTA2P09210 222 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 STX2P32856 288 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 COPB2P35606 906 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 HIRAP54198 1017 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 JAM2P57087 298 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 HTRA3P83110 453 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 DYNC1I2Q13409 638 aaKnown RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 CUL3Q13618 768 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 DACT2Q5SW24 774 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 ARHGEF18Q6ZSZ5 1173 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 CYFIP1Q7L576 1253 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 VSIG1Q86XK7 387 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 KIAA0825Q8IV33 1275 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
UBAP1-202ENST00000359544 CERS5Q8N5B7 392 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 GORASP1Q9BQQ3 440 aa16■□□□□ 0.15
UBAP1-202ENST00000359544 TUBP50607 506 aa15.99■□□□□ 0.15
UBAP1-202ENST00000359544 RASSF2P50749 326 aa15.99■□□□□ 0.15
UBAP1-202ENST00000359544 GRIK5Q16478 980 aa15.99■□□□□ 0.15
UBAP1-202ENST00000359544 PPP1R15BQ5SWA1 713 aa15.99■□□□□ 0.15
UBAP1-202ENST00000359544 RSBN1LQ6PCB5 846 aaPredicted RBP15.99■□□□□ 0.15
UBAP1-202ENST00000359544 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
UBAP1-202ENST00000359544 ECHDC2Q86YB7 292 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms