RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 KCNQ3O43525 872 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 PALMO75781 387 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 PPP2R2AP63151 447 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 ATP2C1P98194 919 aaPredicted RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 KCNH2Q12809 1159 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 PPP6R3Q5H9R7 873 aaPredicted RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 ANO5Q75V66 913 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 TRMT10CQ7L0Y3 403 aaKnown RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 PIGBQ92521 554 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 ATP6V1G3Q96LB4 118 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 FOPNLQ96NB1 174 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 MAP3K14Q99558 947 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 PARD6BQ9BYG5 372 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 SAMSN1Q9NSI8 373 aaKnown RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 OLA1Q9NTK5 396 aaKnown RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 INO80Q9ULG1 1556 aaPredicted RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 TADA3O75528 432 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 SLC16A2P36021 539 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 CRKP46108 304 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 BCAR1P56945 870 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 TBC1D1Q86TI0 1168 aaPredicted RBP6.38□□□□□ -1.39
PTPRT-201ENST00000356100 ULK4Q96C45 1275 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 DTNBP1Q96EV8 351 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 CPDO75976 1380 aa6.38□□□□□ -1.39
PTPRT-201ENST00000356100 LRRC53A6NM62 1247 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ZNF197O14709 1029 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 GAS2O43903 313 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 E2F6O75461 281 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SMYD4Q8IYR2 804 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 NAF1Q96HR8 494 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 DCP1AQ9NPI6 582 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 CLIC2O15247 247 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 NCF2P19878 526 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TRAPPC11Q7Z392 1133 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 CYTH2Q99418 400 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ECE2O60344 883 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 FTCDO95954 541 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 IL10P22301 178 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 GRAMD1BQ3KR37 738 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 NUGGCQ68CJ6 796 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SETD3Q86TU7 594 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ZC3H18Q86VM9 953 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 FRMD8P1Q9BZ68 369 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PUS3Q9BZE2 481 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PTPRUQ92729 1446 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 C19orf81C9J6K1 198 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 GH2P01242 217 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 GUCY2CP25092 1073 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 GNA15P30679 374 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ZNF677Q86XU0 584 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SCFD2Q8WU76 684 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 STAMBPL1Q96FJ0 436 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 POLR3FQ9H1D9 316 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 UTP6Q9NYH9 597 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TBK1Q9UHD2 729 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ABT1Q9ULW3 272 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 MYO3AQ8NEV4 1616 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 EIF2AK2P19525 551 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 HOXA13P31271 388 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 CTTNQ14247 550 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 RIBC1Q8N443 379 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 RDM1Q8NG50 284 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 APBB2Q92870 758 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SPATA33Q96N06 139 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ZMAT2Q96NC0 199 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 CARNS1A5YM72 827 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 BRAFP15056 766 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PPHLN1Q8NEY8 458 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 DBNDD1Q9H9R9 158 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 NGRNQ9NPE2 291 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 USP42Q9H9J4 1324 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 POTEMA6NI47 508 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 RASSF10A6NK89 507 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 MMP10P09238 476 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SERPINB9P50453 376 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 LRIG3Q6UXM1 1119 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 C3orf20Q8ND61 904 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 RASGRP4Q8TDF6 673 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 USP13Q92995 863 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ANTXR1Q9H6X2 564 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 C17orf75Q9HAS0 396 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PCDHA6Q9UN73 950 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PCDHA8Q9Y5H6 950 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ZNF335Q9H4Z2 1342 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 Q3C1V9 767 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 RASSF3Q86WH2 238 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 ANKRD13CQ8N6S4 541 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 PARK7Q99497 189 aaKnown RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 CCSER1Q9C0I3 900 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 NEUROG2Q9H2A3 272 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
PTPRT-201ENST00000356100 TJP2Q9UDY2 1190 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SNX5Q9Y5X3 404 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 SPATA31A3Q5VYP0 1347 aa6.37□□□□□ -1.39
PTPRT-201ENST00000356100 IGSF9BQ9UPX0 1349 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms