RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MYO1DO94832 1006 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 ACAT1P24752 427 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 TBC1D1Q86TI0 1168 aaPredicted RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 WDR12Q9GZL7 423 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 NMRK1Q9NWW6 199 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 WDR36Q8NI36 951 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 ASNSD1Q9NWL6 643 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 PECAM1P16284 738 aaPredicted RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 TRAPPC11Q7Z392 1133 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 LINC00301Q8NCQ3 95 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 MCRS1Q96EZ8 462 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 ZNF184Q99676 751 aaPredicted RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 KLHL20Q9Y2M5 609 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 MRPL11Q9Y3B7 192 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 NFIAQ12857 509 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 ODR4Q5SWX8 454 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 LINC00523Q86TU6 105 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 A1CFQ9NQ94 594 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 MAPRE3Q9UPY8 281 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 TRIM49P0CI25 452 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 TRIM49CP0CI26 452 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 CCNE1P24864 410 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 IFRD2Q12894 506 aaPredicted RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
HTT-201ENST00000355072 ICE1Q9Y2F5 2266 aa8.48□□□□□ -1.05
HTT-201ENST00000355072 CHL1O00533 1208 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 ZBED1O96006 694 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 MIS18BP1Q6P0N0 1132 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 APOA5Q6Q788 366 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 ULK2Q8IYT8 1036 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 RHOBTB2Q9BYZ6 727 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 PRDM16Q9HAZ2 1276 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 EMC3Q9P0I2 261 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 MYL6P60660 151 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 KRT76Q01546 638 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 TTC27Q6P3X3 843 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 AP3S1Q92572 193 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 SLC10A4Q96EP9 437 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 RFC4P35249 363 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 SPOPLQ6IQ16 392 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 FAM81AQ8TBF8 368 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 NCLNQ969V3 563 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 PDHA1P08559 390 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 AKAP5P24588 427 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 IL12RB1P42701 662 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 VCPP55072 806 aaKnown RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 POLR2FP61218 127 aaKnown RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 ROR2Q01974 943 aaKnown RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 CENPCQ03188 943 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 PIK3C3Q8NEB9 887 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 ATP6V1E2Q96A05 226 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 RHOBTB1O94844 696 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 JAK3P52333 1124 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 PRKAA2P54646 552 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 CYB5D1Q6P9G0 228 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 INPP5DQ92835 1189 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 NR1H4Q96RI1 486 aaPredicted RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 BUB1O43683 1085 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 KRT72Q14CN4 511 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 C16orf72Q14CZ0 275 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 LRRC39Q96DD0 335 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 ADD3Q9UEY8 706 aaKnown RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.47□□□□□ -1.05
HTT-201ENST00000355072 K7ENM7 598 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 SNAP91O60641 907 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 ACSL3O95573 720 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 IFNAR1P17181 557 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 DISC1Q9NRI5 854 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 DESI2Q9BSY9 194 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.055e-7■■■■■ 43.4
HTT-201ENST00000355072 KCNQ3O43525 872 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 HP1BP3Q5SSJ5 553 aaPredicted RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 BHMTQ93088 406 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 UFL1O94874 794 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 IFNAR2P48551 515 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 BLOC1S5Q8TDH9 187 aa8.47□□□□□ -1.05
HTT-201ENST00000355072 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
HTT-201ENST00000355072 PRPF3O43395 683 aaKnown RBP8.46□□□□□ -1.05
HTT-201ENST00000355072 COPZ1P61923 177 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 DPCR1Q3MIW9 517 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 TTBK2Q6IQ55 1244 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 PMF1Q6P1K2 205 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 SHQ1Q6PI26 577 aaKnown RBP8.46□□□□□ -1.05
HTT-201ENST00000355072 UNC13DQ70J99 1090 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 DNAAF3Q8N9W5 541 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 PPP2R3CQ969Q6 453 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 POC1B-GALNT4F8VUJ3 575 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 PSTPIP1O43586 416 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 ECDO95905 644 aaPredicted RBP8.46□□□□□ -1.05
HTT-201ENST00000355072 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.05
HTT-201ENST00000355072 ARFIP2P53365 341 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 PTGDRQ13258 359 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 ADNPQ9H2P0 1102 aa8.46□□□□□ -1.05
HTT-201ENST00000355072 WBP11Q9Y2W2 641 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms