RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 COG5Q9UP83 839 aa16.83■□□□□ 0.29
MBD1-205ENST00000353909 CALCAP01258 141 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 EMC2Q15006 297 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 XKR3Q5GH77 459 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 PEX26Q7Z412 305 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 SLFN11Q7Z7L1 901 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 ZNF302Q9NR11 478 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 ARHGAP28Q9P2N2 729 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 MAPK13O15264 365 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 CYP26A1O43174 497 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 PGK2P07205 417 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 POLGP54098 1239 aaPredicted RBP16.83■□□□□ 0.28
MBD1-205ENST00000353909 SLC47A2Q86VL8 602 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 RIN2Q8WYP3 895 aaPredicted RBP16.83■□□□□ 0.28
MBD1-205ENST00000353909 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.28
MBD1-205ENST00000353909 BICD1Q96G01 975 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 PCYT2Q99447 389 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 TXNRD2Q9NNW7 524 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 STIM2Q9P246 746 aa16.83■□□□□ 0.28
MBD1-205ENST00000353909 MAFBQ9Y5Q3 323 aaPredicted RBP16.83■□□□□ 0.28
MBD1-205ENST00000353909 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 P4HA2O15460 535 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 CEP104O60308 925 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 STAM2O75886 525 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 NOP9Q86U38 636 aaKnown RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 NT5DC3Q86UY8 548 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 DNERQ8NFT8 737 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 AENQ8WTP8 325 aaKnown RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 TAF4BQ92750 862 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 FBXL18Q96ME1 805 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 STXBP5LQ9Y2K9 1186 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 CENPFP49454 3210 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 EDN1P05305 212 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 SNRPFP62306 86 aaKnown RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 DRP2Q13474 957 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 KRT39Q6A163 491 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 SV2AQ7L0J3 742 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 KLHL7Q8IXQ5 586 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 RPUSD2Q8IZ73 545 aaKnown RBP16.82■□□□□ 0.28
MBD1-205ENST00000353909 TATDN2Q93075 761 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 CCDC102AQ96A19 550 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 AP1M1Q9BXS5 423 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 C17orf75Q9HAS0 396 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 INTUQ9ULD6 942 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 HPCAL4Q9UM19 191 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 LOC285556D6RIA3 1793 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 PAPPA2Q9BXP8 1791 aa16.82■□□□□ 0.28
MBD1-205ENST00000353909 A0A0A6YYK5 440 aaPredicted RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 ATG7O95352 703 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 OATP04181 439 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 TMEM253P0C7T8 217 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 CHRNB2P17787 502 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ICAM3P32942 547 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 CYP24A1Q07973 514 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 PRPF4BQ13523 1007 aaKnown RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 LY6KQ17RY6 165 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 SLC17A8Q8NDX2 589 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 EPS8L1Q8TE68 723 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 CTNNBL1Q8WYA6 563 aaPredicted RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 RFFLQ8WZ73 363 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ZNF516Q92618 1163 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 DKC1O60832 514 aaKnown RBP eCLIP16.81■□□□□ 0.28
MBD1-205ENST00000353909 FARP2O94887 1054 aaPredicted RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 GLRA2P23416 452 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 MCM3P25205 808 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ACOT2P49753 483 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 Q3C1V9 767 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ZNF771Q7L3S4 317 aaPredicted RBP16.81■□□□□ 0.28
MBD1-205ENST00000353909 HELQQ8TDG4 1101 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 RNF14Q9UBS8 474 aa16.81■□□□□ 0.28
MBD1-205ENST00000353909 ATMINO43313 823 aaPredicted RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 CNMDO75829 334 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 FTLP02792 175 aaPredicted RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 RFX1P22670 979 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 CARSP49589 748 aaKnown RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 PPATQ06203 517 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 IFI16Q16666 785 aaKnown RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 ZBTB41Q5SVQ8 909 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 TMEM63BQ5T3F8 832 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 SND1Q7KZF4 910 aaKnown RBP eCLIP16.8■□□□□ 0.28
MBD1-205ENST00000353909 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 GPD1LQ8N335 351 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 IFT74Q96LB3 600 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 CEP89Q96ST8 783 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 NOCTQ9UK39 431 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms