RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 HSD17B14Q9BPX1 270 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 CAPS2Q9BXY5 557 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 THAP2Q9H0W7 228 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TMEM206Q9H813 350 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 PXMP2Q9NR77 195 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TELO2Q9Y4R8 837 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 FOXN3O00409 490 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-201ENST00000351288 IRF6O14896 467 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TUBBP07437 444 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 CNGA1P29973 690 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 ACTR2P61160 394 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TNNC1P63316 161 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TRAPPC12Q8WVT3 735 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 AKT3Q9Y243 479 aa11.21□□□□□ -0.61
SMPD4-201ENST00000351288 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 SLX4Q8IY92 1834 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 BRCA2P51587 3418 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 ERLIN2O94905 339 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 KCNA3P22001 575 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 MARCKSL1P49006 195 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 AARSP49588 968 aaKnown RBP eCLIP11.21□□□□□ -0.62
SMPD4-201ENST00000351288 LIG3P49916 1009 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 BFSP1Q12934 665 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 C1orf186Q6ZWK4 172 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 SESTD1Q86VW0 696 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 RNF10Q8N5U6 811 aaKnown RBP11.21□□□□□ -0.62
SMPD4-201ENST00000351288 TPCN2Q8NHX9 752 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 RIT2Q99578 217 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 SLC38A10Q9HBR0 1119 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 AGO4Q9HCK5 861 aaKnown RBP11.21□□□□□ -0.62
SMPD4-201ENST00000351288 PLAAQ9Y263 795 aa11.21□□□□□ -0.62
SMPD4-201ENST00000351288 CYP3A4P08684 503 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 CYP2C8P10632 490 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 FERP16591 822 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 SEMA3FQ13275 785 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 VGLL4Q14135 290 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 TMEM132BQ14DG7 1078 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 TRIP13Q15645 432 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 KAZNQ674X7 775 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 RPUSD2Q8IZ73 545 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 MPHOSPH6Q99547 160 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 PCDHB4Q9Y5E5 795 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 ANKRD31Q8N7Z5 1873 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 LY75O60449 1722 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 FTLP02792 175 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 LMNB1P20700 586 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 SNRNP35Q16560 246 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 DAB2IPQ5VWQ8 1189 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 RNPC3Q96LT9 517 aaKnown RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 GMLQ99445 158 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 PCDHGC5Q9Y5F6 944 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 GOLGA6L10A0A0M3HER8 536 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 ATP2C2O75185 946 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 JAK3P52333 1124 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 TREML2Q5T2D2 321 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-201ENST00000351288 FAM118BQ9BPY3 351 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
SMPD4-201ENST00000351288 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 GOLGA8SH3BPF8 625 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 DKC1O60832 514 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 NPTX2P47972 431 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 PDE6CP51160 858 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 PPP1R7Q15435 360 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 UBAP2Q5T6F2 1119 aaKnown RBP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 SPOPLQ6IQ16 392 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 INTS8Q75QN2 995 aaKnown RBP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 GSTA5Q7RTV2 222 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 FBXO16Q8IX29 292 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 CCDC105Q8IYK2 499 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 SLC5A5Q92911 643 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
SMPD4-201ENST00000351288 ATP6V0A4Q9HBG4 840 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 PSD3Q9NYI0 1048 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 CNTNAP1P78357 1384 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 F8VZ95 297 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 PIK3R2O00459 728 aa11.19□□□□□ -0.62
SMPD4-201ENST00000351288 PLS3P13797 630 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms