RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 AGPAT3Q9NRZ7 376 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 LRFN2Q9ULH4 789 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 MANSC4A6NHS7 340 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 AP5Z1O43299 807 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 KPNA6O60684 536 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 ATF2P15336 505 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
SMAD9-201ENST00000350148 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
SMAD9-201ENST00000350148 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 UCHL3P15374 230 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 CUL1Q13616 776 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 CD302Q8IX05 232 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 TMC2Q8TDI7 906 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 AGPAT1Q99943 283 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 ADAM22Q9P0K1 906 aa13.02□□□□□ -0.32
SMAD9-201ENST00000350148 LOC102724159A0A0B4J2E5 919 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 RTN2O75298 545 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 PWP2Q15269 919 aaKnown RBP13.02□□□□□ -0.33
SMAD9-201ENST00000350148 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 ZNF507Q8TCN5 953 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 WHAMMQ8TF30 809 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 MAGOHBQ96A72 148 aaKnown RBP13.02□□□□□ -0.33
SMAD9-201ENST00000350148 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 VTA1Q9NP79 307 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 CDCA5Q96FF9 252 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.33
SMAD9-201ENST00000350148 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 NFASCO94856 1347 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 TLDC2A0PJX2 215 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 SGSM1Q2NKQ1 1148 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 SAAL1Q96ER3 474 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 ACAP3Q96P50 834 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 WNT8AQ9H1J5 351 aa13.02□□□□□ -0.33
SMAD9-201ENST00000350148 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
SMAD9-201ENST00000350148 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
SMAD9-201ENST00000350148 NCAPHQ15003 741 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 DNAJC7Q99615 494 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ENC1O14682 589 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 HYIQ5T013 277 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 BZW1Q7L1Q6 419 aaKnown RBP13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 UVRAGQ9P2Y5 699 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 PODXLO00592 558 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 MEIS2O14770 477 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 TCF7P36402 384 aaPredicted RBP13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ADCY8P40145 1251 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 SLC1A1P43005 524 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 KCNH4Q9UQ05 1017 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
SMAD9-201ENST00000350148 GYPCP04921 128 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 DCAF4L1Q3SXM0 396 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 FAM71BQ8TC56 605 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 KRT12Q99456 494 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 UBIAD1Q9Y5Z9 338 aa13.01□□□□□ -0.33
SMAD9-201ENST00000350148 ECEL1O95672 775 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 RFC1P35251 1148 aaPredicted RBP13□□□□□ -0.33
SMAD9-201ENST00000350148 FCGRTP55899 365 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 SENP7Q9BQF6 1050 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM62Q9BVG3 475 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 FAM86B1E9PN63 330 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 BUB1BO60566 1050 aaPredicted RBP13□□□□□ -0.33
SMAD9-201ENST00000350148 HUS1O60921 280 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 PALMO75781 387 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 FTCDO95954 541 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 FAM86B2P0C5J1 330 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 OSTNP61366 133 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 RBP5P82980 135 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 KLHDC7AQ5VTJ3 777 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 GFPT1Q06210 699 aaPredicted RBP13□□□□□ -0.33
SMAD9-201ENST00000350148 PLA2G4FQ68DD2 849 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 TMEM143Q96AN5 459 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 KRT1P04264 644 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 CD58P19256 250 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 GNA15P30679 374 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
SMAD9-201ENST00000350148 SGO2Q562F6 1265 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 EMBQ6PCB8 327 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 HINFPQ9BQA5 517 aa13□□□□□ -0.33
SMAD9-201ENST00000350148 TRIM66O15016 1216 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ALDH5A1P51649 535 aaPredicted RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 NAB2Q15742 525 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms