RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 STRNO43815 780 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 RRP9O43818 475 aaKnown RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 EXTL3O43909 919 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ADCY3O60266 1144 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 EVI5O60447 810 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 MOCS3O95396 460 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ZBTB48P10074 688 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 KLRC1P26715 233 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GCLMP48507 274 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SLC26A2P50443 739 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 MXI1P50539 228 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GPC3P51654 580 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 CHMP4BP1P59074 171 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 CETN1Q12798 172 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 MKRN4PQ13434 485 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 BMS1Q14692 1282 aaKnown RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PSMD6Q15008 389 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PLCB4Q15147 1175 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 CCL15Q16663 113 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 HSDL1Q3SXM5 330 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 IER5Q5VY09 327 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SPRYD7Q5W111 196 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 TAPT1Q6NXT6 567 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 FBXO38Q6PIJ6 1188 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 MAMDC4Q6UXC1 1216 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 C15orf39Q6ZRI6 1047 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ARMCX2Q7L311 632 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 EEPD1Q7L9B9 569 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ZNF572Q7Z3I7 529 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ARHGEF19Q8IW93 802 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 FBXO16Q8IX29 292 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GPD1LQ8N335 351 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PDCL2Q8N4E4 241 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GPR161Q8N6U8 529 aaKnown RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 DEPTORQ8TB45 409 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 LNX1Q8TBB1 728 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SCFD2Q8WU76 684 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PSPC1Q8WXF1 523 aaKnown RBP7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SLC7A3Q8WY07 619 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 GOLGA1Q92805 767 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SEMA4DQ92854 862 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SAAL1Q96ER3 474 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 NOX5Q96PH1 765 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 KATNBL1Q9H079 304 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 TMEM8AQ9HCN3 771 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 CLEC11AQ9Y240 323 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 JRKLQ9Y4A0 524 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 PCDHGC5Q9Y5F6 944 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 SAR1BQ9Y6B6 198 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ADGRA2Q96PE1 1338 aa7.51□□□□□ -1.21
TRIM55-203ENST00000350034 ARID2Q68CP9 1835 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 A0A0A6YYK5 440 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 A0A0B4J269 797 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CTAGE15A4D2H0 777 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ZNF233A6NK53 670 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ENC1O14682 589 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 LRRN2O75325 713 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 TFRCP02786 760 aaKnown RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CCDC172P0C7W6 258 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CTAGE8P0CG41 777 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 PNMA6AP0CW24 399 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 TXNP10599 105 aaKnown RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ARID5AQ03989 594 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ITIH3Q06033 890 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ARHGAP1Q07960 439 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 DRP2Q13474 957 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CAPSQ13938 189 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 HSP90AA2PQ14568 343 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 TTLL4Q14679 1199 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 KIAA0753Q2KHM9 967 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CDCA2Q69YH5 1023 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 KRT39Q6A163 491 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ALKBH5Q6P6C2 394 aaKnown RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CRELD2Q6UXH1 353 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ZPBP2Q6X784 338 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 USP37Q86T82 979 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CTAGE6Q86UF2 777 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 VPS36Q86VN1 386 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 CTAGE4Q8IX94 777 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 DHX37Q8IY37 1157 aaKnown RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 EXOC8Q8IYI6 725 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 FAM71AQ8IYT1 594 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 ANKRD13CQ8N6S4 541 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 MSANTD4Q8NCY6 345 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 POMGNT1Q8WZA1 660 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 COPS5Q92905 334 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 EMID1Q96A84 441 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 SPATA33Q96N06 139 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 PTPN18Q99952 460 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRIM55-203ENST00000350034 TLR10Q9BXR5 811 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 PACSIN1Q9BY11 444 aa7.5□□□□□ -1.21
TRIM55-203ENST00000350034 HAPLN2Q9GZV7 340 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms