RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 EPB41L4BQ9H329 900 aa8.72□□□□□ -1.01
ATG4A-201ENST00000343524 STX18Q9P2W9 335 aaKnown RBP8.72□□□□□ -1.01
ATG4A-201ENST00000343524 DNAJB4Q9UDY4 337 aa8.72□□□□□ -1.01
ATG4A-201ENST00000343524 GGT7Q9UJ14 662 aa8.72□□□□□ -1.01
ATG4A-201ENST00000343524 TRIM33Q9UPN9 1127 aa8.72□□□□□ -1.01
ATG4A-201ENST00000343524 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
ATG4A-201ENST00000343524 TNRC18O15417 2968 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-201ENST00000343524 KIAA1551Q9HCM1 1747 aa8.71□□□□□ -1.01
ATG4A-201ENST00000343524 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.01
ATG4A-201ENST00000343524 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.01
ATG4A-201ENST00000343524 H0Y3Z8 333 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 SMAPO00193 183 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 WDR46O15213 610 aaKnown RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ZPR1O75312 459 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 MBD4O95243 580 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 GNA14O95837 355 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ZNF24P17028 368 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 GNAT2P19087 354 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 CD97P48960 835 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 IFI35P80217 286 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 DSG1Q02413 1049 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 KLRC3Q07444 240 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 CYLC2Q14093 348 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 SLC29A2Q14542 456 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 RCN1Q15293 331 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 HSP90AA5PQ58FG0 334 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 KIAA1755Q5JYT7 1200 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 CENPPQ6IPU0 288 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 DTHD1Q6ZMT9 781 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 SPATA24Q86W54 205 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 SRBD1Q8N5C6 995 aaKnown RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 METTL13Q8N6R0 699 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 LRRC57Q8N9N7 239 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 WDR60Q8WVS4 1066 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 C7orf25Q9BPX7 421 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 PITPNM3Q9BZ71 974 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 PHACTR1Q9C0D0 580 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 BHMT2Q9H2M3 363 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 UNC45AQ9H3U1 944 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 RIC8AQ9NPQ8 531 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 RHBDL2Q9NX52 303 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 TUBGCP4Q9UGJ1 667 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 SUN2Q9UH99 717 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-201ENST00000343524 TBC1D30Q9Y2I9 924 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 ATAD5Q96QE3 1844 aa8.71□□□□□ -1.02
ATG4A-201ENST00000343524 RIPK2O43353 540 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 CCDC22O60826 627 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 GGPS1O95749 300 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 TTLL1O95922 423 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 VEGFAP15692 232 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-201ENST00000343524 CHRNA3P32297 505 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 CASP7P55210 303 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 RAB15P59190 212 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 BPIFB4P59827 614 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 HPCAP84074 193 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 SPIDRQ14159 915 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 C4orf50Q6ZRC1 276 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 RINLQ6ZS11 566 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 SLFN11Q7Z7L1 901 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 PASD1Q8IV76 773 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 AGAP3Q96P47 875 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 DENND2DQ9H6A0 471 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-201ENST00000343524 ABCF2Q9UG63 623 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 CCNL1Q9UK58 526 aaPredicted RBP8.7□□□□□ -1.02
ATG4A-201ENST00000343524 AMFRQ9UKV5 643 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 SMIM23A6NLE4 172 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 UBE2Q2LH0YL09 131 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 EPHB6O15197 1021 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 HNRNPRO43390 633 aaKnown RBP8.7□□□□□ -1.02
ATG4A-201ENST00000343524 PSMG1O95456 288 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 VAV1P15498 845 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 GM2AP17900 193 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
ATG4A-201ENST00000343524 EPHB2P29323 1055 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 ZAP70P43403 619 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 SESN3P58005 492 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 TGFB2P61812 414 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 ASIC1P78348 528 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 FOXO4P98177 505 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 PPARDQ03181 441 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 NR1H3Q13133 447 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 MAPK7Q13164 816 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 GIT2Q14161 759 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 ZCWPW2Q504Y3 356 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 SLC44A4Q53GD3 710 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 CFAP157Q5JU67 520 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 FAM83BQ5T0W9 1011 aa8.7□□□□□ -1.02
ATG4A-201ENST00000343524 C6orf163Q5TEZ5 329 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms