RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 SDC4P31431 198 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 TTC13Q8NBP0 860 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 GMCL1P1Q8NEA9 526 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 PFDN4Q9NQP4 134 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 MAGED2Q9UNF1 606 aaPredicted RBP16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 PLAAQ9Y263 795 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 MT-ND3P03897 115 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 RHOT1Q8IXI2 618 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 WNT8AQ9H1J5 351 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 UNC45AQ9H3U1 944 aa16.67■□□□□ 0.26
CARMIL3-201ENST00000342740 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 RTN2O75298 545 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 BACE1P56817 501 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 TGFB2P61812 414 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 C6orf118Q5T5N4 469 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 APOBEC3HQ6NTF7 200 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 CPSF3Q9UKF6 684 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 MYBL1P10243 752 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 ARP10275 920 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 ANXA13P27216 316 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 IFT88Q13099 833 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 IP6K2Q9UHH9 426 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 SIGLEC1Q9BZZ2 1709 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 HMGB1P1B2RPK0 211 aaPredicted RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 SART1O43290 800 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 LIG3P49916 1009 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 GPRASP2Q96D09 838 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 RSRC1Q96IZ7 334 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 CNOT10Q9H9A5 744 aaKnown RBP16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 LCMT1Q9UIC8 334 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 HEY1Q9Y5J3 304 aa16.66■□□□□ 0.26
CARMIL3-201ENST00000342740 A8MXQ7 604 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RSPH10B2B2RC85 870 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RSPH10BP0C881 870 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 CHRNA3P32297 505 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SCFD2Q8WU76 684 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 ACAP3Q96P50 834 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 IPO11Q9UI26 975 aaKnown RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 A0A1W2PQJ5 194 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SPDYE16A6NNV3 312 aaPredicted RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 PFDN6O15212 129 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 ZNF185O15231 689 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 KRT7P08729 469 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 ADCY2Q08462 1091 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 NCOA4Q13772 614 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SLC30A5Q8TAD4 765 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 ANKS1AQ92625 1134 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 SAYSD1Q9NPB0 183 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RFC5P40937 340 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 GYS2P54840 703 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RPS6KA2Q15349 733 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RAPH1Q70E73 1250 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
CARMIL3-201ENST00000342740 FAM102AQ5T9C2 384 aaPredicted RBP16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 TTI2Q6NXR4 508 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 TYW5A2RUC4 315 aaKnown RBP16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 SH3BP5O60239 455 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 GH1P01241 217 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 CA4P22748 312 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 PCK1P35558 622 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 NAB2Q15742 525 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 GRIK5Q16478 980 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 KLHDC7AQ5VTJ3 777 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 MFSD14CQ5VZR4 134 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 PPP1R9AQ9ULJ8 1098 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 PLSCR1O15162 318 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 ACTR2P61160 394 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 NXNQ6DKJ4 435 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 THEM5Q8N1Q8 247 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 SLC35G2Q8TBE7 412 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 TARS2Q9BW92 718 aaKnown RBP16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 SMYD2Q9NRG4 433 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 PARVAQ9NVD7 372 aa16.64■□□□□ 0.25
CARMIL3-201ENST00000342740 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms