RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 LLGL1Q15334 1064 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 GSPT2Q8IYD1 628 aaKnown RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 MSL3Q8N5Y2 521 aaKnown RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 DNERQ8NFT8 737 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PRPF31Q8WWY3 499 aaKnown RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 FNBP1Q96RU3 617 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PARK7Q99497 189 aaKnown RBP14.14□□□□□ -0.15
COL18A1-201ENST00000342220 NUP58Q9BVL2 599 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 APOL6Q9BWW8 343 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 SLC24A3Q9HC58 644 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 HSPBP1Q9NZL4 362 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 PDXKO00764 312 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 TUBBP07437 444 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 BEX3Q00994 111 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 FAM160B1Q5W0V3 765 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 GIMAP7Q8NHV1 300 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 IWS1Q96ST2 819 aa14.14□□□□□ -0.15
COL18A1-201ENST00000342220 GSTTP1A0A1W2PQM5 241 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ZNF263O14978 683 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 LIG3P49916 1009 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ABHD15Q6UXT9 468 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 EFCAB13Q8IY85 973 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 RNPEPQ9H4A4 650 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.13□□□□□ -0.15
COL18A1-201ENST00000342220 KRT5P13647 590 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 MRPS25P82663 173 aaKnown RBP14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CBWD6Q4V339 395 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CBWD3Q5JTY5 395 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CBWD5Q5RIA9 395 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 SFMBT2Q5VUG0 894 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 GBP6Q6ZN66 633 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 EHBP1Q8NDI1 1231 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 FAM71BQ8TC56 605 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 NEK9Q8TD19 979 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ASAP3Q8TDY4 903 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ATP4AP20648 1035 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 MROH8Q9H579 483 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 MAP3K20Q9NYL2 800 aaKnown RBP14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ODF2LQ9ULJ1 636 aa14.13□□□□□ -0.15
COL18A1-201ENST00000342220 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 ARFGEF1Q9Y6D6 1849 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 DKC1O60832 514 aaKnown RBP eCLIP14.12□□□□□ -0.156e-7■■■■■ 36.6
COL18A1-201ENST00000342220 DGAT1O75907 488 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 KRT19P08727 400 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 MYL7Q01449 175 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 EHHADHQ08426 723 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 C2orf54Q08AI8 447 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 KCNMA1Q12791 1236 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 TTC19Q6DKK2 380 aaPredicted RBP14.12□□□□□ -0.15
COL18A1-201ENST00000342220 METTL7BQ6UX53 244 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 XXYLT1Q8NBI6 393 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 RETREG2Q8NC44 543 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 SCFD2Q8WU76 684 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 GOLPH3Q9H4A6 298 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
COL18A1-201ENST00000342220 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 TBX20Q9UMR3 447 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 MAFGO15525 162 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 NEBLO76041 1014 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 MYBL2P10244 700 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 CXCR5P32302 372 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 ZNF394Q53GI3 561 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 ZNF662Q6ZS27 426 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 IFIH1Q9BYX4 1025 aaKnown RBP14.12□□□□□ -0.15
COL18A1-201ENST00000342220 SH3BP1Q9Y3L3 701 aa14.12□□□□□ -0.15
COL18A1-201ENST00000342220 ERLIN2O94905 339 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 MAGEA1P43355 309 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 KIF5AQ12840 1032 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ASIC2Q16515 512 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ZCWPW2Q504Y3 356 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 NIPA1Q7RTP0 329 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 PLEKHH3Q7Z736 793 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 TRIM59Q8IWR1 403 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 OR6J1Q8NGC5 347 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 NLRP7Q8WX94 980 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 KAT5Q92993 513 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ERGIC2Q96RQ1 377 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 FAM204AQ9H8W3 233 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 AOC2O75106 756 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 VAV2P52735 878 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 CKAP4Q07065 602 aaKnown RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 EFCAB12Q6NXP0 572 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 TMEM130Q8N3G9 435 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 RIN2Q8WYP3 895 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 JPH2Q9BR39 696 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ACBD3Q9H3P7 528 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 OLFML3Q9NRN5 406 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ATP2A1O14983 1001 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 RNF40O75150 1001 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 GNA14O95837 355 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 SYF2O95926 243 aaKnown RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 MYL3P08590 195 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms