RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TRIM7Q9C029 511 aa8.83□□□□□ -1
HPS4-201ENST00000336873 GEMIN8Q9NWZ8 242 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 PARP4Q9UKK3 1724 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 A0A087WUV0 522 aaPredicted RBP8.83□□□□□ -1
HPS4-201ENST00000336873 H0Y3Z8 333 aa8.83□□□□□ -1
HPS4-201ENST00000336873 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
HPS4-201ENST00000336873 AGPSO00116 658 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SLC12A3P55017 1021 aa8.83□□□□□ -1
HPS4-201ENST00000336873 PPP2R5AQ15172 486 aa8.83□□□□□ -1
HPS4-201ENST00000336873 FRMD5Q7Z6J6 570 aa8.83□□□□□ -1
HPS4-201ENST00000336873 USP37Q86T82 979 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ARHGEF19Q8IW93 802 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ZNF713Q8N859 430 aaPredicted RBP8.83□□□□□ -1
HPS4-201ENST00000336873 TAS1R2Q8TE23 839 aa8.83□□□□□ -1
HPS4-201ENST00000336873 WHAMMQ8TF30 809 aa8.83□□□□□ -1
HPS4-201ENST00000336873 RFFLQ8WZ73 363 aa8.83□□□□□ -1
HPS4-201ENST00000336873 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 AGPAT1Q99943 283 aa8.83□□□□□ -1
HPS4-201ENST00000336873 KAT6AQ92794 2004 aa8.83□□□□□ -1
HPS4-201ENST00000336873 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
HPS4-201ENST00000336873 TARSL2A2RTX5 802 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 K7ERI5 159 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ECEL1O95672 775 aa8.83□□□□□ -1
HPS4-201ENST00000336873 KRT10P13645 584 aa8.83□□□□□ -1
HPS4-201ENST00000336873 MFAP3P55082 362 aa8.83□□□□□ -1
HPS4-201ENST00000336873 GPC5P78333 572 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SARNPP82979 210 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ZNF473Q8WTR7 871 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ATG4CQ96DT6 458 aa8.83□□□□□ -1
HPS4-201ENST00000336873 CRAMP1Q96RY5 1269 aa8.83□□□□□ -1
HPS4-201ENST00000336873 TTYH3Q9C0H2 523 aa8.83□□□□□ -1
HPS4-201ENST00000336873 CD248Q9HCU0 757 aa8.83□□□□□ -1
HPS4-201ENST00000336873 RNF146Q9NTX7 359 aa8.83□□□□□ -1
HPS4-201ENST00000336873 TRPC6Q9Y210 931 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SPEF2Q9C093 1822 aa8.82□□□□□ -1
HPS4-201ENST00000336873 A0A1W2PQJ5 194 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ESYT2A0FGR8 921 aa8.82□□□□□ -1
HPS4-201ENST00000336873 GRAP2O75791 330 aa8.82□□□□□ -1
HPS4-201ENST00000336873 GAS8O95995 478 aa8.82□□□□□ -1
HPS4-201ENST00000336873 SHBGP04278 402 aa8.82□□□□□ -1
HPS4-201ENST00000336873 GAP43P17677 238 aa8.82□□□□□ -1
HPS4-201ENST00000336873 SCP2P22307 547 aa8.82□□□□□ -1
HPS4-201ENST00000336873 GUCY2CP25092 1073 aa8.82□□□□□ -1
HPS4-201ENST00000336873 CNGA1P29973 690 aa8.82□□□□□ -1
HPS4-201ENST00000336873 MDH1P40925 334 aaKnown RBP8.82□□□□□ -1
HPS4-201ENST00000336873 PMS2P54278 862 aa8.82□□□□□ -1
HPS4-201ENST00000336873 IFI35P80217 286 aaPredicted RBP8.82□□□□□ -1
HPS4-201ENST00000336873 SNRNP35Q16560 246 aaKnown RBP8.82□□□□□ -1
HPS4-201ENST00000336873 GADL1Q6ZQY3 521 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ANKMY2Q8IV38 441 aa8.82□□□□□ -1
HPS4-201ENST00000336873 TTLL6Q8N841 843 aa8.82□□□□□ -1
HPS4-201ENST00000336873 C7orf31Q8N865 590 aa8.82□□□□□ -1
HPS4-201ENST00000336873 FBF1Q8TES7 1133 aa8.82□□□□□ -1
HPS4-201ENST00000336873 PSMD1Q99460 953 aa8.82□□□□□ -1
HPS4-201ENST00000336873 CCDC77Q9BR77 488 aa8.82□□□□□ -1
HPS4-201ENST00000336873 INTUQ9ULD6 942 aa8.82□□□□□ -1
HPS4-201ENST00000336873 MRPL42Q9Y6G3 142 aaKnown RBP8.82□□□□□ -1
HPS4-201ENST00000336873 CENPFP49454 3210 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ASNSP08243 561 aa8.82□□□□□ -1
HPS4-201ENST00000336873 WEE2P0C1S8 567 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ATF2P15336 505 aa8.82□□□□□ -1
HPS4-201ENST00000336873 CHN1P15882 459 aa8.82□□□□□ -1
HPS4-201ENST00000336873 PPP3CAQ08209 521 aa8.82□□□□□ -1
HPS4-201ENST00000336873 CCDC6Q16204 474 aa8.82□□□□□ -1
HPS4-201ENST00000336873 KCNT1Q5JUK3 1230 aa8.82□□□□□ -1
HPS4-201ENST00000336873 MEI1Q5TIA1 1274 aa8.82□□□□□ -1
HPS4-201ENST00000336873 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
HPS4-201ENST00000336873 PHLDB3Q6NSJ2 640 aa8.82□□□□□ -1
HPS4-201ENST00000336873 CASC4Q6P4E1 433 aa8.82□□□□□ -1
HPS4-201ENST00000336873 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
HPS4-201ENST00000336873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
HPS4-201ENST00000336873 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
HPS4-201ENST00000336873 EFCAB13Q8IY85 973 aa8.82□□□□□ -1
HPS4-201ENST00000336873 IQCDQ96DY2 449 aa8.82□□□□□ -1
HPS4-201ENST00000336873 NCAPGQ9BPX3 1015 aa8.82□□□□□ -1
HPS4-201ENST00000336873 NEUROG2Q9H2A3 272 aa8.82□□□□□ -1
HPS4-201ENST00000336873 HAUS2Q9NVX0 235 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ADAM22Q9P0K1 906 aa8.82□□□□□ -1
HPS4-201ENST00000336873 NYAP2Q9P242 653 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ZNF70Q9UC06 446 aaPredicted RBP8.82□□□□□ -1
HPS4-201ENST00000336873 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.82□□□□□ -1
HPS4-201ENST00000336873 COL4A1P02462 1669 aa8.82□□□□□ -1
HPS4-201ENST00000336873 GMNCA6NCL1 334 aa8.82□□□□□ -1
HPS4-201ENST00000336873 M0R2N6 131 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ATP9AO75110 1047 aa8.82□□□□□ -1
HPS4-201ENST00000336873 P4HBP07237 508 aaKnown RBP8.82□□□□□ -1
HPS4-201ENST00000336873 TRAF1Q13077 416 aa8.82□□□□□ -1
HPS4-201ENST00000336873 MTMR3Q13615 1198 aa8.82□□□□□ -1
HPS4-201ENST00000336873 OTOP1Q7RTM1 612 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ZNF720Q7Z2F6 126 aa8.82□□□□□ -1
HPS4-201ENST00000336873 JAMLQ86YT9 394 aa8.82□□□□□ -1
HPS4-201ENST00000336873 C4orf33Q8N1A6 199 aa8.82□□□□□ -1
HPS4-201ENST00000336873 LRRC71Q8N4P6 559 aa8.82□□□□□ -1
HPS4-201ENST00000336873 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
HPS4-201ENST00000336873 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.82□□□□□ -1
HPS4-201ENST00000336873 RPAP3Q9H6T3 665 aaPredicted RBP8.82□□□□□ -1
HPS4-201ENST00000336873 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
HPS4-201ENST00000336873 ANAPC5Q9UJX4 755 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms