RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 UBE4BO95155 1302 aa15.45■□□□□ 0.06
APOBEC3B-202ENST00000335760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZBBXA8MT70 800 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 HNRNPDLO14979 420 aaKnown RBP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 N4BP3O15049 544 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 EFCAB14O75071 495 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 IBSPP21815 317 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 EEF1DP3Q658K8 133 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 SLC27A1Q6PCB7 646 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 HERVK_113Q902F9 699 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 CCDC51Q96ER9 411 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 GTPBP4Q9BZE4 634 aaKnown RBP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 TSPYL2Q9H2G4 693 aaPredicted RBP15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 IKZF4Q9H2S9 585 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 TMEM206Q9H813 350 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 MAPK8IP1Q9UQF2 711 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 TNFSF13BQ9Y275 285 aa15.44■□□□□ 0.06
APOBEC3B-202ENST00000335760 MICAL3Q7RTP6 2002 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 ANKRD63C9JTQ0 380 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 KIF20AO95235 890 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 NPTXRO95502 500 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 PIGRP01833 764 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 HOXD13P35453 343 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 MATR3P43243 847 aaKnown RBP eCLIP15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 WDR5P61964 334 aaKnown RBP15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 MORC3Q14149 939 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 BMT2Q1RMZ1 405 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 C9orf50Q5SZB4 431 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 MPZL3Q6UWV2 235 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 TRIML1Q8N9V2 468 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZBTB45Q96K62 511 aaPredicted RBP15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 ADPGKQ9BRR6 497 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 TCHPQ9BT92 498 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 EIF2AQ9BY44 585 aaKnown RBP15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 ANKFY1Q9P2R3 1169 aa15.43■□□□□ 0.06
APOBEC3B-202ENST00000335760 TISP43B9A030 160 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 C9IYK1 514 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 TOM1L1O75674 476 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 AMHP03971 560 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 BMP6P22004 513 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 PROZP22891 400 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 KCNJ6P48051 423 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 SHHQ15465 462 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZNF568Q3ZCX4 644 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 SLC39A4Q6P5W5 647 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 RBM43Q6ZSC3 357 aaKnown RBP15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 TRIM6Q9C030 488 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 PTPRHQ9HD43 1115 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 FAM105AQ9NUU6 356 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 CXXC1Q9P0U4 656 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 PCDHB2Q9Y5E7 798 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZMYM2Q9UBW7 1377 aa15.42■□□□□ 0.06
APOBEC3B-202ENST00000335760 A0A0U1RQF3 1178 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 ABLIM1O14639 778 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 CLDN3O15551 220 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 HARSP12081 509 aaKnown RBP15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 SKIP12755 728 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 BMP8BP34820 402 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 PRCPP42785 496 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 RAB27AP51159 221 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 FAM189BP81408 668 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 DEFB103AP81534 67 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 KNOP1Q1ED39 458 aaKnown RBP15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 DCAF4L1Q3SXM0 396 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 APBB1IPQ7Z5R6 666 aaPredicted RBP15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 ECHDC2Q86YB7 292 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 GUF1Q8N442 669 aaKnown RBP15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 RNPC3Q96LT9 517 aaKnown RBP15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 TRAIPQ9BWF2 469 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 GBP3Q9H0R5 595 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 CDT1Q9H211 546 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 SLC4A7Q9Y6M7 1214 aa15.41■□□□□ 0.06
APOBEC3B-202ENST00000335760 TGFB1I1O43294 461 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 MCF2P10911 925 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 MCL1Q07820 350 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 STIM1Q13586 685 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 NOLC1Q14978 699 aaKnown RBP eCLIP15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 SLFN12LQ6IEE8 588 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 ADSSL1Q8N142 457 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 HAPLN2Q9GZV7 340 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 KCTD10Q9H3F6 313 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 LRFN2Q9ULH4 789 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 HES2Q9Y543 173 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 IPPQ9Y573 584 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 PCDHB7Q9Y5E2 793 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 STYXL1Q9Y6J8 313 aa15.4■□□□□ 0.06
APOBEC3B-202ENST00000335760 ZNF623O75123 536 aa15.39■□□□□ 0.05
APOBEC3B-202ENST00000335760 UPP2O95045 317 aa15.39■□□□□ 0.05
APOBEC3B-202ENST00000335760 CD44P16070 742 aaKnown RBP15.39■□□□□ 0.05
APOBEC3B-202ENST00000335760 NLRP12P59046 1061 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms