RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 SOX5P35711 763 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 DR1Q01658 176 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 TARS2Q9BW92 718 aaKnown RBP16.03■□□□□ 0.16
C9orf47-201ENST00000334490 KIAA1683Q9H0B3 1180 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 UBN1Q9NPG3 1134 aa16.03■□□□□ 0.16
C9orf47-201ENST00000334490 CXCL11O14625 94 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 HERVK_113P62684 666 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 DHX9Q08211 1270 aaKnown RBP16.02■□□□□ 0.16
C9orf47-201ENST00000334490 NCOA4Q13772 614 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.16
C9orf47-201ENST00000334490 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 MCUQ8NE86 351 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 RNF25Q96BH1 459 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-201ENST00000334490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-201ENST00000334490 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 CREB3O43889 395 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 ARP10275 920 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 ITGA4P13612 1032 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 GRIN1Q05586 938 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 FBXO16Q8IX29 292 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-201ENST00000334490 SPATC1LQ9H0A9 340 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.16
C9orf47-201ENST00000334490 STK25O00506 426 aa16.02■□□□□ 0.15
C9orf47-201ENST00000334490 CYP11B2P19099 503 aa16.02■□□□□ 0.15
C9orf47-201ENST00000334490 NXNQ6DKJ4 435 aa16.02■□□□□ 0.15
C9orf47-201ENST00000334490 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.15
C9orf47-201ENST00000334490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.02■□□□□ 0.15
C9orf47-201ENST00000334490 EPHB4P54760 987 aa16.02■□□□□ 0.15
C9orf47-201ENST00000334490 KCTD17Q8N5Z5 321 aa16.02■□□□□ 0.15
C9orf47-201ENST00000334490 TFRCP02786 760 aaKnown RBP16.01■□□□□ 0.15
C9orf47-201ENST00000334490 APPL2Q8NEU8 664 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 SIK2Q9H0K1 926 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 KLHL8Q9P2G9 620 aaPredicted RBP16.01■□□□□ 0.15
C9orf47-201ENST00000334490 PITPNM2Q9BZ72 1349 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 TM4SF1P30408 202 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 SREBF1P36956 1147 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 NME3Q13232 169 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 BTBD8Q5XKL5 378 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 ZNF449Q6P9G9 518 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 CDR2LQ86X02 465 aaPredicted RBP16.01■□□□□ 0.15
C9orf47-201ENST00000334490 KCNB2Q92953 911 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 GOLGA8KD6RF30 607 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 PDHXO00330 501 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 MSH2P43246 934 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
C9orf47-201ENST00000334490 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 MYLK4Q86YV6 388 aaPredicted RBP16.01■□□□□ 0.15
C9orf47-201ENST00000334490 DCLK2Q8N568 766 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 EDEM3Q9BZQ6 932 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 FMO5P49326 533 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 KCTD16Q68DU8 428 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 RIOX1Q9H6W3 641 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 TACC3Q9Y6A5 838 aa16.01■□□□□ 0.15
C9orf47-201ENST00000334490 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 ADCY1Q08828 1119 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 VGLL2Q8N8G2 317 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 CYP26B1Q9NR63 512 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 ATP11AP98196 1134 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 APBA1Q02410 837 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 SGSM1Q2NKQ1 1148 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 TTC13Q8NBP0 860 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 PARD3BQ8TEW8 1205 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 ARHGEF2Q92974 986 aaKnown RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 PDCD2LQ9BRP1 358 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 DSG3P32926 999 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 PDXDC1Q6P996 788 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 SPATA2LQ8IUW3 424 aaPredicted RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 IL17RBQ9NRM6 502 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 C17orf102A2RUQ5 167 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 CCDC188H7C350 402 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 LCP1P13796 627 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 PSMD6Q15008 389 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 KIFC3Q9BVG8 833 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 DNAJC17Q9NVM6 304 aaKnown RBP16■□□□□ 0.15
C9orf47-201ENST00000334490 HPCAL4Q9UM19 191 aa16■□□□□ 0.15
C9orf47-201ENST00000334490 APOEP02649 317 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 PDGFRBP09619 1106 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 NFKBIAP25963 317 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 GNGT1P63211 74 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 SLC7A5Q01650 507 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 MOXD1Q6UVY6 613 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 SAMD3Q8N6K7 520 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 SYT2Q8N9I0 419 aaPredicted RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 SPON2Q9BUD6 331 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 APEX2Q9UBZ4 518 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 LIMA1Q9UHB6 759 aaKnown RBP15.99■□□□□ 0.15
C9orf47-201ENST00000334490 IP6K2Q9UHH9 426 aa15.99■□□□□ 0.15
C9orf47-201ENST00000334490 TLK1Q9UKI8 766 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms