RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MLKLQ8NB16 471 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 NOC3LQ8WTT2 800 aaKnown RBP18.1■□□□□ 0.49
SHOX-201ENST00000334060 BICD1Q96G01 975 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 ACCSQ96QU6 501 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 NFKBIZQ9BYH8 718 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 TMEM134Q9H6X4 195 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 PCDHB13Q9Y5F0 798 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 ACKR2O00590 384 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 CSF2RAP15509 400 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 CYP2J2P51589 502 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 RBL2Q08999 1139 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
SHOX-201ENST00000334060 LRRC55Q6ZSA7 311 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 RSPH3Q86UC2 560 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
SHOX-201ENST00000334060 IRF2BP1Q8IU81 584 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 RDH13Q8NBN7 331 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
SHOX-201ENST00000334060 PIN4Q9Y237 131 aaKnown RBP18.1■□□□□ 0.49
SHOX-201ENST00000334060 CEP290O15078 2479 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 CDH23Q9H251 3354 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 TLR3O15455 904 aaKnown RBP18.09■□□□□ 0.49
SHOX-201ENST00000334060 RPS6KA5O75582 802 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 ACRP10323 421 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 ATP1A3P13637 1013 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 CCNE1P24864 410 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 COBLL1Q53SF7 1204 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 UBXN11Q5T124 520 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 SRGAP1Q7Z6B7 1085 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 GBP3Q9H0R5 595 aa18.09■□□□□ 0.49
SHOX-201ENST00000334060 CNTNAP2Q9UHC6 1331 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 M0QZ92 97 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 EPHB4P54760 987 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 POU5F1BQ06416 359 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 STRN3Q13033 797 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 ATF7IP2Q5U623 682 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.49
SHOX-201ENST00000334060 DBF4BQ8NFT6 615 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 CAGE1Q8TC20 777 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 CDT1Q9H211 546 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 RNF39Q9H2S5 420 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 FANCLQ9NW38 375 aa18.08■□□□□ 0.49
SHOX-201ENST00000334060 TULP1O00294 542 aaPredicted RBP18.08■□□□□ 0.48
SHOX-201ENST00000334060 FAM189A1O60320 539 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 ACOT2P49753 483 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 LIG4P49917 911 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 PLEKHO2Q8TD55 490 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 C2orf40Q9H1Z8 148 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 AGPAT5Q9NUQ2 364 aa18.08■□□□□ 0.48
SHOX-201ENST00000334060 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 PSMA7O14818 248 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 AP5Z1O43299 807 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 AKAP3O75969 853 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 ERLIN2O94905 339 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 NR3C1P04150 777 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 ADRB2P07550 413 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 PROZP22891 400 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 EFNA5P52803 228 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 CRELD2Q6UXH1 353 aaPredicted RBP18.07■□□□□ 0.48
SHOX-201ENST00000334060 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 CBWD2Q8IUF1 395 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 DHTKD1Q96HY7 919 aaPredicted RBP18.07■□□□□ 0.48
SHOX-201ENST00000334060 MRPL4Q9BYD3 311 aaKnown RBP18.07■□□□□ 0.48
SHOX-201ENST00000334060 TYW1Q9NV66 732 aaKnown RBP18.07■□□□□ 0.48
SHOX-201ENST00000334060 PRMT7Q9NVM4 692 aaPredicted RBP18.07■□□□□ 0.48
SHOX-201ENST00000334060 RWDD2AQ9UIY3 292 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 NFE2L3Q9Y4A8 694 aa18.07■□□□□ 0.48
SHOX-201ENST00000334060 CAPN15O75808 1086 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 NPTXRO95502 500 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 AFF1P51825 1210 aaKnown RBP18.06■□□□□ 0.48
SHOX-201ENST00000334060 TERF1P54274 439 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 BFSP2Q13515 415 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 FAM187BQ17R55 369 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 TSHZ1Q6ZSZ6 1077 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 THNSL1Q8IYQ7 743 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 BADQ92934 168 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 SRRTQ9BXP5 876 aaKnown RBP18.06■□□□□ 0.48
SHOX-201ENST00000334060 IFIH1Q9BYX4 1025 aaKnown RBP18.06■□□□□ 0.48
SHOX-201ENST00000334060 NXF3Q9H4D5 531 aaKnown RBP18.06■□□□□ 0.48
SHOX-201ENST00000334060 HSPBP1Q9NZL4 362 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 TRAF3IP3Q9Y228 551 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 A0A1B0GUA9 196 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 PIGRP01833 764 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 NR2F2P24468 414 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 PAK2Q13177 524 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 TMEM132AQ24JP5 1023 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 ZNF568Q3ZCX4 644 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 ARMCX5Q6P1M9 558 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 C16orf59Q7L2K0 433 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 POMGNT1Q8WZA1 660 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 KCNN1Q92952 543 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 LPPQ93052 612 aa18.06■□□□□ 0.48
SHOX-201ENST00000334060 PDXKO00764 312 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 KIAA0355O15063 1070 aa18.05■□□□□ 0.48
SHOX-201ENST00000334060 SFPQP23246 707 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHOX-201ENST00000334060 MATR3P43243 847 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms