RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SPATA32Q96LK8 384 aa16.32■□□□□ 0.2
TSPO-201ENST00000329563 NRDE2Q9H7Z3 1164 aa16.32■□□□□ 0.2
TSPO-201ENST00000329563 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
TSPO-201ENST00000329563 DNAJB4Q9UDY4 337 aa16.32■□□□□ 0.2
TSPO-201ENST00000329563 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
TSPO-201ENST00000329563 HOXB8P17481 243 aaPredicted RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 TECP42680 631 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 ALDH7A1P49419 539 aaKnown RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 RAB27AP51159 221 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 AMHR2Q16671 573 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 TMEM184AQ6ZMB5 413 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 TMC7Q7Z402 723 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 MRPL10Q7Z7H8 261 aaKnown RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 LINC00301Q8NCQ3 95 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 PRRX2Q99811 253 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 EIF2AQ9BY44 585 aaKnown RBP16.31■□□□□ 0.2
TSPO-201ENST00000329563 RNF39Q9H2S5 420 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 GPRC5CQ9NQ84 441 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
TSPO-201ENST00000329563 SPTLC2O15270 562 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 ASAP2O43150 1006 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 B4GALT5O43286 388 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 USO1O60763 962 aaKnown RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 ZC3H11AO75152 810 aaKnown RBP eCLIP16.3■□□□□ 0.2
TSPO-201ENST00000329563 PPP6R2O75170 966 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 DGAT1O75907 488 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 DDHD2O94830 711 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 OR52Z1P0C646 297 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 PTMSP20962 102 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 PRPHP41219 470 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 ECM1Q16610 540 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 NOMO2Q5JPE7 1267 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 POTEGQ6S5H5 508 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 HFE2Q6ZVN8 426 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 SUGP1Q8IWZ8 645 aaKnown RBP16.3■□□□□ 0.2
TSPO-201ENST00000329563 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 CASP10Q92851 521 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 CPB2Q96IY4 423 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 WDFY4Q6ZS81 3184 aa16.3■□□□□ 0.2
TSPO-201ENST00000329563 GALTP07902 379 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 SLC11A1P49279 550 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 ATP2C1P98194 919 aaPredicted RBP16.29■□□□□ 0.2
TSPO-201ENST00000329563 PTGDRQ13258 359 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
TSPO-201ENST00000329563 PTPAQ15257 358 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 CES5AQ6NT32 575 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 ANKRD54Q6NXT1 300 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 TRIM67Q6ZTA4 783 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 BMP8AQ7Z5Y6 402 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 CDR2LQ86X02 465 aaPredicted RBP16.29■□□□□ 0.2
TSPO-201ENST00000329563 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
TSPO-201ENST00000329563 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 SUSD6Q92537 303 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 TMEM169Q96HH4 297 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
TSPO-201ENST00000329563 TUFT1Q9NNX1 390 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 STK39Q9UEW8 545 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 HES2Q9Y543 173 aa16.29■□□□□ 0.2
TSPO-201ENST00000329563 CACNA1HO95180 2353 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 C2orf71A6NGG8 1288 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 INO80B-WBP1J3KQ70 363 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
TSPO-201ENST00000329563 ARF4P18085 180 aaPredicted RBP16.28■□□□□ 0.2
TSPO-201ENST00000329563 POU5F1BQ06416 359 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 GIT2Q14161 759 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 SYCE2Q6PIF2 218 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 MRPL43Q8N983 215 aaKnown RBP16.28■□□□□ 0.2
TSPO-201ENST00000329563 FEZF2Q8TBJ5 459 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 BSNDQ8WZ55 320 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 IGSF21Q96ID5 467 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 NECTIN4Q96NY8 510 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
TSPO-201ENST00000329563 GBP3Q9H0R5 595 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 ZBP1Q9H171 429 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 S1PR5Q9H228 398 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 RSAD1Q9HA92 442 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
TSPO-201ENST00000329563 NR2E1Q9Y466 385 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 IPPQ9Y573 584 aa16.28■□□□□ 0.2
TSPO-201ENST00000329563 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 GOLGA6L4A6NEF3 574 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 TMEM221A6NGB7 291 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 M0R296 226 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 ERLIN2O94905 339 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms