RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 RNF207Q6ZRF8 634 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 P2RX7Q99572 595 aaKnown RBP15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 ZSWIM1Q9BR11 485 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 SLCO1B3Q9NPD5 702 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 PASKQ96RG2 1323 aa15.34■□□□□ 0.05
CHRNA3-201ENST00000326828 FAM86B1E9PN63 330 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 EML1O00423 815 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 FAM86B2P0C5J1 330 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 RARGP13631 454 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 CACNB3P54284 484 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 MTM1Q13496 603 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 SLMAPQ14BN4 828 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 TPTE2Q6XPS3 522 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 PTF1AQ7RTS3 328 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 CCHCR1Q8TD31 782 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 AGPAT1Q99943 283 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 NKIRAS1Q9NYS0 192 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 SYNGAP1Q96PV0 1343 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 ADCY8P40145 1251 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 EPC2Q52LR7 807 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 SGO2Q562F6 1265 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 ECHDC2Q86YB7 292 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 TBC1D22AQ8WUA7 517 aa15.33■□□□□ 0.04
CHRNA3-201ENST00000326828 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 GNPATO15228 680 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 LGR5O75473 907 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 TTLL1O95922 423 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 NPEPPSP55786 919 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 TCP10Q12799 353 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 RIPK1Q13546 671 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 ZFYVE27Q5T4F4 411 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 MIS18BP1Q6P0N0 1132 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 SYT2Q8N9I0 419 aaPredicted RBP15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 TRIM7Q9C029 511 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 APEX2Q9UBZ4 518 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 WDR91A4D1P6 747 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 PODXLO00592 558 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 CBX6O95503 412 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 CETPP11597 493 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 RRP1BQ14684 758 aaKnown RBP15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 LONP2Q86WA8 852 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 ARHGEF19Q8IW93 802 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 CHST7Q9NS84 486 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 POC1B-GALNT4F8VUJ3 575 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 DDX39AO00148 427 aaKnown RBP15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 SMNDC1O75940 238 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 SGPL1O95470 568 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 PPP4CP60510 307 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 GTF2IP78347 998 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 ODR4Q5SWX8 454 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 PPM1KQ8N3J5 372 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 FBF1Q8TES7 1133 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 NAF1Q96HR8 494 aaKnown RBP15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 FAM84AQ96KN4 292 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 GPR88Q9GZN0 384 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 ZCWPW1Q9H0M4 648 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 MYLK2Q9H1R3 596 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 INTUQ9ULD6 942 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
CHRNA3-201ENST00000326828 CHRNB2P17787 502 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 FAM182BQ5T319 152 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 SLC13A5Q86YT5 568 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 TAB3Q8N5C8 712 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 NUP85Q9BW27 656 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 DNAJC18Q9H819 358 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 RXFP1Q9HBX9 757 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 BATF3Q9NR55 127 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 PARP2Q9UGN5 583 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 ROBO3Q96MS0 1386 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 SMIM24O75264 130 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 ENTPD5O75356 428 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 SSTR3P32745 418 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 ZNF131P52739 623 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 ITGA8P53708 1063 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 RHBDL3P58872 404 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 GPC5P78333 572 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 CGB2Q6NT52 195 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 LLGL2Q6P1M3 1020 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 C4orf33Q8N1A6 199 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 ZNF653Q96CK0 615 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 NUDCD1Q96RS6 583 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 EIF2AK1Q9BQI3 630 aaKnown RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 CD209Q9NNX6 404 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 DDX4Q9NQI0 724 aaKnown RBP15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
CHRNA3-201ENST00000326828 TTC7AQ9ULT0 858 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms