RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 KIFC3Q9BVG8 833 aa9.04□□□□□ -0.96
CCNC-201ENST00000326298 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
CCNC-201ENST00000326298 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
CCNC-201ENST00000326298 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
CCNC-201ENST00000326298 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
CCNC-201ENST00000326298 LIMCH1Q9UPQ0 1083 aa9.04□□□□□ -0.96
CCNC-201ENST00000326298 EFEMP2O95967 443 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 ASGR2P07307 311 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 NCLP19338 710 aaKnown RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 CDC25AP30304 524 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 ZXDAP98168 799 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 IL17AQ16552 155 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 TMC5Q6UXY8 1006 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 FAM43BQ6ZT52 329 aaPredicted RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 TRIM67Q6ZTA4 783 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 COLGALT2Q8IYK4 626 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 FBXO18Q8NFZ0 1043 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 ASIC4Q96FT7 647 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 JPH2Q9BR39 696 aaPredicted RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 BRMS1Q9HCU9 246 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 ANKEF1Q9NU02 776 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 HCN4Q9Y3Q4 1203 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 PP2D1A8MPX8 630 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 DGAT1O75907 488 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 RAB27AP51159 221 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 DSC1Q08554 894 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 C8orf76Q96K31 380 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 NAP1L4Q99733 375 aaKnown RBP9.03□□□□□ -0.96
CCNC-201ENST00000326298 ADAM7Q9H2U9 754 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 PCDHB6Q9Y5E3 794 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 IRAK3Q9Y616 596 aa9.03□□□□□ -0.96
CCNC-201ENST00000326298 DOCK6Q96HP0 2047 aa9.02□□□□□ -0.96
CCNC-201ENST00000326298 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.971e-5■□□□□ 10.7
CCNC-201ENST00000326298 ERLIN2O94905 339 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 NPTXRO95502 500 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 SPATA31D3P0C874 917 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 ITGA4P13612 1032 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 VCPP55072 806 aaKnown RBP9.02□□□□□ -0.97
CCNC-201ENST00000326298 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 SPATA31D4Q6ZUB0 917 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 ST13P5Q8NFI4 369 aaPredicted RBP9.02□□□□□ -0.97
CCNC-201ENST00000326298 TCP11Q8WWU5 503 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 GPR62Q9BZJ7 368 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 CSRNP2Q9H175 543 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 C2orf16Q68DN1 1984 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 PLXNA3P51805 1871 aa9.02□□□□□ -0.97
CCNC-201ENST00000326298 A0A1B0GUA9 196 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 TMEM221A6NGB7 291 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 LRRIQ4A6NIV6 560 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 M0R296 226 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 ASAP2O43150 1006 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 N4BP1O75113 896 aaKnown RBP9.01□□□□□ -0.97
CCNC-201ENST00000326298 BRD1O95696 1058 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 OR1G1P47890 313 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 CLCN4P51793 760 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 TRIM29Q14134 588 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 MXD4Q14582 209 aaPredicted RBP9.01□□□□□ -0.97
CCNC-201ENST00000326298 EEF1DP3Q658K8 133 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 NOTUMQ6P988 496 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 KCNK18Q7Z418 384 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 RNF168Q8IYW5 571 aaPredicted RBP9.01□□□□□ -0.97
CCNC-201ENST00000326298 TMEM130Q8N3G9 435 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 PGBD4Q96DM1 585 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 PPME1Q9Y570 386 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 PTGESO14684 152 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 INPPL1O15357 1258 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 TEX28O15482 410 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 RFPL2O75678 378 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 ALDH2P05091 517 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 OR52Z1P0C646 297 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 SKIP12755 728 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 RPL17P18621 184 aaKnown RBP9.01□□□□□ -0.97
CCNC-201ENST00000326298 TTC38Q5R3I4 469 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 NOSTRINQ8IVI9 506 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 PRSS33Q8NF86 280 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 HASPINQ8TF76 798 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 CASP10Q92851 521 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 PBXIP1Q96AQ6 731 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
CCNC-201ENST00000326298 TDRD15B5MCY1 1934 aaKnown RBP9□□□□□ -0.97
CCNC-201ENST00000326298 GAS2O43903 313 aaKnown RBP9□□□□□ -0.97
CCNC-201ENST00000326298 HOXB8P17481 243 aaPredicted RBP9□□□□□ -0.97
CCNC-201ENST00000326298 LIG1P18858 919 aa9□□□□□ -0.97
CCNC-201ENST00000326298 NHLH1Q02575 133 aa9□□□□□ -0.97
CCNC-201ENST00000326298 POU5F1BQ06416 359 aa9□□□□□ -0.97
CCNC-201ENST00000326298 NAB2Q15742 525 aa9□□□□□ -0.97
CCNC-201ENST00000326298 PTPN21Q16825 1174 aa9□□□□□ -0.97
CCNC-201ENST00000326298 KIAA0319Q5VV43 1072 aa9□□□□□ -0.97
CCNC-201ENST00000326298 CDCA2Q69YH5 1023 aaPredicted RBP9□□□□□ -0.97
CCNC-201ENST00000326298 PADI6Q6TGC4 694 aa9□□□□□ -0.97
CCNC-201ENST00000326298 ALYREFQ86V81 257 aaKnown RBP9□□□□□ -0.97
CCNC-201ENST00000326298 URGCPQ8TCY9 931 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms