RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 H2AFVQ71UI9 128 aa12.99□□□□□ -0.33
NCL-201ENST00000322723 SAMD7Q7Z3H4 446 aa12.99□□□□□ -0.33
NCL-201ENST00000322723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.336e-28■■□□□ 13
NCL-201ENST00000322723 SHC3Q92529 594 aa12.99□□□□□ -0.33
NCL-201ENST00000322723 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
NCL-201ENST00000322723 PLXNA1Q9UIW2 1896 aa12.99□□□□□ -0.33
NCL-201ENST00000322723 CXCR5P32302 372 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 CD101Q93033 1021 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
NCL-201ENST00000322723 PLS1Q14651 629 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 DDX1Q92499 740 aaKnown RBP12.98□□□□□ -0.33
NCL-201ENST00000322723 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 COG5Q9UP83 839 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 PCDHA10Q9Y5I2 948 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
NCL-201ENST00000322723 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 NR3C2P08235 984 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 ABCD1P33897 745 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 NPTX2P47972 431 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 CYP2J2P51589 502 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
NCL-201ENST00000322723 METTL13Q8N6R0 699 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 KREMEN1Q96MU8 473 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
NCL-201ENST00000322723 GEMIN8Q9NWZ8 242 aaKnown RBP12.98□□□□□ -0.33
NCL-201ENST00000322723 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 SPDYE16A6NNV3 312 aaPredicted RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 IQCKQ8N0W5 287 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 GARTP22102 1010 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 PAFAH1B1P43034 410 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 GPIHBP1Q8IV16 184 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.333e-10■□□□□ 10.7
NCL-201ENST00000322723 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 IRF6O14896 467 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 GZMAP12544 262 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 DNERQ8NFT8 737 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 BCAS4Q8TDM0 211 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 PARD3BQ8TEW8 1205 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 SUFUQ9UMX1 484 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 SYNGAP1Q96PV0 1343 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 DDX39AO00148 427 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 ZMYND10O75800 440 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 ATP4AP20648 1035 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 LMBR1Q8WVP7 490 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 SEMA4DQ92854 862 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 ARHGEF26Q96DR7 871 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.332e-66■□□□□ 9
NCL-201ENST00000322723 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
NCL-201ENST00000322723 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
NCL-201ENST00000322723 CCDC188H7C350 402 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 EXOC3O60645 756 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.334e-16■■□□□ 13.1
NCL-201ENST00000322723 HSPA9P38646 679 aaKnown RBP12.96□□□□□ -0.33
NCL-201ENST00000322723 SLC20A2Q08357 652 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 FAM76AQ8TAV0 307 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
NCL-201ENST00000322723 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 GPRC5CQ9NQ84 441 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 TAS2R14Q9NYV8 317 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
NCL-201ENST00000322723 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.33
NCL-201ENST00000322723 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 NLRX1Q86UT6 975 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 SLC35G2Q8TBE7 412 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
NCL-201ENST00000322723 SCAF8Q9UPN6 1271 aaKnown RBP12.96□□□□□ -0.33
NCL-201ENST00000322723 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 CYP1A2P05177 515 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 ARID5AQ03989 594 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.34
NCL-201ENST00000322723 TCERG1LQ5VWI1 586 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 PLA2G4FQ68DD2 849 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 C8orf74Q6P047 294 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 CDHR1Q96JP9 859 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 PCDHB18PQ96TA0 734 aa12.96□□□□□ -0.34
NCL-201ENST00000322723 SLITRK6Q9H5Y7 841 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms