RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 RAB3IL1Q8TBN0 382 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 CPA5Q8WXQ8 436 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 RILPQ96NA2 401 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 NUP85Q9BW27 656 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 ADRA2BP18089 450 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 PMS2P54278 862 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 PSMD6Q15008 389 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
VARS2-201ENST00000321897 LRRC34Q8IZ02 419 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 HIPK4Q8NE63 616 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 ZWILCHQ9H900 591 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
VARS2-201ENST00000321897 FOXN3O00409 490 aaPredicted RBP16.31■□□□□ 0.2
VARS2-201ENST00000321897 UPP2O95045 317 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 RPA1P27694 616 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 ACSF2Q96CM8 615 aaPredicted RBP16.31■□□□□ 0.2
VARS2-201ENST00000321897 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
VARS2-201ENST00000321897 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 SCOCQ9UIL1 159 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 PASKQ96RG2 1323 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 CCT8L1PA6NM43 557 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 ECEL1O95672 775 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 SOX5P35711 763 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 KLHDC7AQ5VTJ3 777 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 CROCCP2Q86T23 111 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 C7orf31Q8N865 590 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 IWS1Q96ST2 819 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 BFSP1Q12934 665 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■■□ 26.1
VARS2-201ENST00000321897 FAM53CQ9NYF3 392 aa16.31■□□□□ 0.2
VARS2-201ENST00000321897 BRAFP15056 766 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 GIT2Q14161 759 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 TRPM8Q7Z2W7 1104 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 MIEF2Q96C03 454 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 NUDCD1Q96RS6 583 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 SH3GL3Q99963 347 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 PARP2Q9UGN5 583 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 NFIBO00712 420 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 PON1P27169 355 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 LRRC23Q53EV4 343 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 HAS1Q92839 578 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 TMEM206Q9H813 350 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 PCSK1NQ9UHG2 260 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 PDXKO00764 312 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.2
VARS2-201ENST00000321897 CA4P22748 312 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 IFRD2Q12894 506 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 AENQ8WTP8 325 aaKnown RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 STK24Q9Y6E0 443 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 CLDN3O15551 220 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 EIF3BP55884 814 aaKnown RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 IRX4P78413 519 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 IL9RQ01113 521 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 LONRF1Q17RB8 773 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 STRIP1Q5VSL9 837 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 ELOA2Q8IYF1 753 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 KCNH7Q9NS40 1196 aa16.3■□□□□ 0.2
VARS2-201ENST00000321897 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
VARS2-201ENST00000321897 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 COG7P83436 770 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 APOBEC3HQ6NTF7 200 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 DAGLBQ8NCG7 672 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 RSAD2Q8WXG1 361 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 TLR10Q9BXR5 811 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 CCDC188H7C350 402 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 SPAG7O75391 227 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 YARSP54577 528 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 PDE1CQ14123 709 aaPredicted RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 C6orf118Q5T5N4 469 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 CCDC137Q6PK04 289 aaKnown RBP16.29■□□□□ 0.2
VARS2-201ENST00000321897 SLC20A1Q8WUM9 679 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 ADAM22Q9P0K1 906 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 ANAPC5Q9UJX4 755 aa16.29■□□□□ 0.2
VARS2-201ENST00000321897 A0A0G2JND7 137 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms