RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 RESP18Q5W5W9 173 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 IQUBQ8NA54 791 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 MAFAQ8NHW3 353 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-201ENST00000320936 URGCPQ8TCY9 931 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 SPIRE2Q8WWL2 714 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 CLP1Q92989 425 aaKnown RBP20.58■□□□□ 0.89
CIRBP-201ENST00000320936 C11orf84Q9BUA3 381 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-201ENST00000320936 NXF3Q9H4D5 531 aaKnown RBP20.58■□□□□ 0.89
CIRBP-201ENST00000320936 PDZD7Q9H5P4 517 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 AAASQ9NRG9 546 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 TYW1Q9NV66 732 aaKnown RBP20.58■□□□□ 0.89
CIRBP-201ENST00000320936 ARHGAP28Q9P2N2 729 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 HCSTQ9UBK5 93 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 HES2Q9Y543 173 aa20.58■□□□□ 0.89
CIRBP-201ENST00000320936 TTLL13PA6NNM8 815 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 CSPG5O95196 566 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 EDN1P05305 212 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 BMPR1AP36894 532 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 RNASELQ05823 741 aaKnown RBP20.57■□□□□ 0.88
CIRBP-201ENST00000320936 APBB1IPQ7Z5R6 666 aaPredicted RBP20.57■□□□□ 0.88
CIRBP-201ENST00000320936 SMG8Q8ND04 991 aaKnown RBP20.57■□□□□ 0.88
CIRBP-201ENST00000320936 PPM1EQ8WY54 764 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 DDX12PQ92771 950 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 BICD1Q96G01 975 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 MRPL4Q9BYD3 311 aaKnown RBP20.57■□□□□ 0.88
CIRBP-201ENST00000320936 TMEM134Q9H6X4 195 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
CIRBP-201ENST00000320936 MYMKA6NI61 221 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 POLR2DO15514 142 aaKnown RBP20.56■□□□□ 0.88
CIRBP-201ENST00000320936 IDEP14735 1019 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 LAG3P18627 525 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 NOMO2Q5JPE7 1267 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 MRPL10Q7Z7H8 261 aaKnown RBP20.56■□□□□ 0.88
CIRBP-201ENST00000320936 FAM178BQ8IXR5 827 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 TMEM161BQ8NDZ6 487 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 STAMQ92783 540 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 GBP3Q9H0R5 595 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 CUEDC2Q9H467 287 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 GDPD2Q9HCC8 539 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 UBN1Q9NPG3 1134 aa20.56■□□□□ 0.88
CIRBP-201ENST00000320936 TDRD15B5MCY1 1934 aaKnown RBP20.56■□□□□ 0.88
CIRBP-201ENST00000320936 H3BNC9 293 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 RB1P06400 928 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 MAPTP10636 758 aaKnown RBP20.55■□□□□ 0.88
CIRBP-201ENST00000320936 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
CIRBP-201ENST00000320936 ZNF131P52739 623 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 CCDC85BQ15834 202 aaPredicted RBP20.55■□□□□ 0.88
CIRBP-201ENST00000320936 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 AGMOQ6ZNB7 445 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 HAUS6Q7Z4H7 955 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 THNSL1Q8IYQ7 743 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 COLGALT1Q8NBJ5 622 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 TCHPQ9BT92 498 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 PLVAPQ9BX97 442 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 LRRC27Q9C0I9 530 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 TNMDQ9H2S6 317 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 ANKFY1Q9P2R3 1169 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 PARP2Q9UGN5 583 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 KCNH3Q9ULD8 1083 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 COL6A3P12111 3177 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 PLXNA4Q9HCM2 1894 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 EYSQ5T1H1 3165 aa20.55■□□□□ 0.88
CIRBP-201ENST00000320936 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 TRAK2O60296 914 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 ZC3H11AO75152 810 aaKnown RBP eCLIP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 OFD1O75665 1012 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 LINC00271P0C7V0 271 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 HARSP12081 509 aaKnown RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 AKAP5P24588 427 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 MLH1P40692 756 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 NCKAP1LP55160 1127 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 E2F4Q16254 413 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 PTPROQ16827 1216 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 EEF1DP3Q658K8 133 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 LRRC55Q6ZSA7 311 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 TAS1R3Q7RTX0 852 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 SFR1Q86XK3 245 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 RSPH1Q8WYR4 309 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 ZNF558Q96NG5 402 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 FAM193BQ96PV7 902 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 PYM1Q9BRP8 204 aaKnown RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 NTPCRQ9BSD7 190 aaKnown RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 TARS2Q9BW92 718 aaKnown RBP20.54■□□□□ 0.88
CIRBP-201ENST00000320936 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 TBC1D13Q9NVG8 400 aa20.54■□□□□ 0.88
CIRBP-201ENST00000320936 A0A1B0GVL5 298 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 C5orf67F2Z3F1 127 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 LPXNO60711 386 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 GAP43P17677 238 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 PBX3P40426 434 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 AMPD3Q01432 767 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 ADALQ6DHV7 355 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 CEP57L1Q8IYX8 460 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 KLHL23Q8NBE8 558 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
CIRBP-201ENST00000320936 GAD1Q99259 594 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms