RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 AMHP03971 560 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 RALAP11233 206 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 ITIH3Q06033 890 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 DCAF4L1Q3SXM0 396 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 KRT39Q6A163 491 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 HAUS1Q96CS2 278 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 CYP4F11Q9HBI6 524 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
NBPF3-201ENST00000318220 SLC37A4O43826 429 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 AKAP5P24588 427 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 CTNNB1P35222 781 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 KIF11P52732 1056 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 DCLK2Q8N568 766 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 PDE11AQ9HCR9 933 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.19□□□□□ -0.14
NBPF3-201ENST00000318220 SLIT2O94813 1529 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 MYL4P12829 197 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 CASP14P31944 242 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 ST8SIA6P61647 398 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 WDR18Q9BV38 432 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 VAV2P52735 878 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 TOGARAM2Q6ZUX3 1019 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 MRIQ9BWK5 157 aa14.19□□□□□ -0.14
NBPF3-201ENST00000318220 TYW1Q9NV66 732 aaKnown RBP14.19□□□□□ -0.14
NBPF3-201ENST00000318220 TLR2O60603 784 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 KRT10P13645 584 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 KCNH2Q12809 1159 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 SEPT6Q14141 434 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 REPS2Q8NFH8 660 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 BRI3BPQ8WY22 251 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 HSPH1Q92598 858 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PGLYRP2Q96PD5 576 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 NAGPAQ9UK23 515 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 STAMBPO95630 424 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 MYL1P05976 194 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 THP07101 528 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PCSK1P29120 753 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 CTXN3Q4LDR2 81 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 CATSPER3Q86XQ3 398 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 MIB1Q86YT6 1006 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 UBE4BO95155 1302 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 ATP2C1P98194 919 aaPredicted RBP14.18□□□□□ -0.14
NBPF3-201ENST00000318220 EHHADHQ08426 723 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PDIA5Q14554 519 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 ZNF449Q6P9G9 518 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 SYCE1Q8N0S2 351 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 KCTD6Q8NC69 237 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 TBX3O15119 743 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 SRGAP2O75044 1071 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 SKIP12755 728 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PSMA2P25787 234 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 RINT1Q6NUQ1 792 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 LEKR1Q6ZMV7 388 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 PALB2Q86YC2 1186 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 ATP8B4Q8TF62 1192 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 RNPC3Q96LT9 517 aaKnown RBP14.18□□□□□ -0.14
NBPF3-201ENST00000318220 GAS2L1Q99501 681 aaPredicted RBP14.18□□□□□ -0.14
NBPF3-201ENST00000318220 CYP39A1Q9NYL5 469 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 STAP1Q9ULZ2 295 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 GVINP1Q7Z2Y8 2422 aa14.18□□□□□ -0.14
NBPF3-201ENST00000318220 FOXN1O15353 648 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 PRCPP42785 496 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 DCP1BQ8IZD4 617 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 PPLO60437 1756 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 PDS5AQ29RF7 1337 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 POLR3GO15318 223 aaPredicted RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 CYP11B2P19099 503 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 RPA1P27694 616 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 SDC4P31431 198 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 CTU1Q7Z7A3 348 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 CACUL1Q86Y37 369 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 FBXL13Q8NEE6 735 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 MRPS31Q92665 395 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 IFT122Q9HBG6 1241 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 SAMD15Q9P1V8 674 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 ACTN4O43707 911 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 SLU7O95391 586 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 CD4P01730 458 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 LGALS2P05162 132 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 EEF1GP26641 437 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 PSMC1P62191 440 aaKnown RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 NCOA4Q13772 614 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 SGO2Q562F6 1265 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 FAM102AQ5T9C2 384 aaPredicted RBP14.17□□□□□ -0.14
NBPF3-201ENST00000318220 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
NBPF3-201ENST00000318220 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
NBPF3-201ENST00000318220 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
NBPF3-201ENST00000318220 AVPR1AP37288 418 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms