RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 STK33Q9BYT3 514 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TUT1Q9H6E5 874 aaKnown RBP18.18■□□□□ 0.5
CLCF1-201ENST00000312438 PLXNB2O15031 1838 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TRPM7Q96QT4 1865 aa18.18■□□□□ 0.5
CLCF1-201ENST00000312438 MYH9P35579 1960 aaKnown RBP18.18■□□□□ 0.5
CLCF1-201ENST00000312438 TMEM88BA6NKF7 163 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 KRT86O43790 486 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
CLCF1-201ENST00000312438 RFX1P22670 979 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 RGS2P41220 211 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 JAM2P57087 298 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 CYP27A1Q02318 531 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 CYP24A1Q07973 514 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 OLFML2BQ68BL8 750 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 RHPN2Q8IUC4 686 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 FMNL3Q8IVF7 1028 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 METTL13Q8N6R0 699 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 SOCS4Q8WXH5 440 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 IRX2Q9BZI1 471 aaPredicted RBP18.17■□□□□ 0.5
CLCF1-201ENST00000312438 TMEM117Q9H0C3 514 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 DNAJC12Q9UKB3 198 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 GJD2Q9UKL4 321 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 AGO2Q9UKV8 859 aaKnown RBP18.17■□□□□ 0.5
CLCF1-201ENST00000312438 ARID2Q68CP9 1835 aa18.17■□□□□ 0.5
CLCF1-201ENST00000312438 COL1A2P08123 1366 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 UQCRHLA0A096LP55 91 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 KIF3CO14782 793 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 CA12O43570 354 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 C22orf31O95567 290 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 UQCRHP07919 91 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 MMP3P08254 477 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 KLRC1P26715 233 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 STAT1P42224 750 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 MXI1P50539 228 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 CRHR2Q13324 411 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 EPC2Q52LR7 807 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 PRAMEF19Q5SWL8 479 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 KRT39Q6A163 491 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 VTI1AQ96AJ9 217 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 WDR24Q96S15 920 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 MRPL4Q9BYD3 311 aaKnown RBP18.16■□□□□ 0.5
CLCF1-201ENST00000312438 USP20Q9Y2K6 914 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 PCDHA13Q9Y5I0 950 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 A0A0B4J269 797 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 LRRIQ3A6PVS8 624 aaPredicted RBP18.16■□□□□ 0.5
CLCF1-201ENST00000312438 TNPO2O14787 897 aaKnown RBP18.16■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF263O14978 683 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 MSCO60682 206 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 ABL1P00519 1130 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 CYP2B6P20813 491 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 GTF2F1P35269 517 aaKnown RBP eCLIP18.16■□□□□ 0.53e-8■■■■■ 35.7
CLCF1-201ENST00000312438 VAV2P52735 878 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 ARID5AQ03989 594 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 POU5F1BQ06416 359 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 MAPK6Q16659 721 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 GJB7Q6PEY0 223 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 TXLNBQ8N3L3 684 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 JAKMIP2Q96AA8 810 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 TSGA10Q9BZW7 698 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 CCDC113Q9H0I3 377 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 TMEM8AQ9HCN3 771 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
CLCF1-201ENST00000312438 GNEQ9Y223 722 aaKnown RBP18.16■□□□□ 0.5
CLCF1-201ENST00000312438 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 DYNC1LI2O43237 492 aaPredicted RBP18.15■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF286BP0CG31 522 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
CLCF1-201ENST00000312438 FERP16591 822 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 PRKCIP41743 596 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 IGBP1P78318 339 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 KIF5AQ12840 1032 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 ZNF569Q5MCW4 686 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 ZBTB45Q96K62 511 aaPredicted RBP18.15■□□□□ 0.5
CLCF1-201ENST00000312438 IFIH1Q9BYX4 1025 aaKnown RBP18.15■□□□□ 0.5
CLCF1-201ENST00000312438 GUCA1BQ9UMX6 200 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 COQ4Q9Y3A0 265 aa18.15■□□□□ 0.5
CLCF1-201ENST00000312438 A6NJR5 290 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 CLDN3O15551 220 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 TOM1L1O75674 476 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 CCDC172P0C7W6 258 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 TMOD1P28289 359 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 MATR3P43243 847 aaKnown RBP eCLIP18.14■□□□□ 0.5
CLCF1-201ENST00000312438 MAGEA1P43355 309 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 CLCN3P51790 818 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 GFPT1Q06210 699 aaPredicted RBP18.14■□□□□ 0.5
CLCF1-201ENST00000312438 PSMD6Q15008 389 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 GPIHBP1Q8IV16 184 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.5
CLCF1-201ENST00000312438 APBA2Q99767 749 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 MSTO1Q9BUK6 570 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 L2HGDHQ9H9P8 463 aa18.14■□□□□ 0.5
CLCF1-201ENST00000312438 LUC7LQ9NQ29 371 aaKnown RBP18.14■□□□□ 0.5
CLCF1-201ENST00000312438 AJAP1Q9UKB5 411 aaPredicted RBP18.14■□□□□ 0.5
CLCF1-201ENST00000312438 TULP1O00294 542 aaPredicted RBP18.14■□□□□ 0.49
CLCF1-201ENST00000312438 FANCGO15287 622 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 ADCY6O43306 1168 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms