RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 FIS1Q9Y3D6 152 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 PTCH1Q13635 1447 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 NPM3O75607 178 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 FAM107AO95990 144 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 A1BGP04217 495 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 HOXC8P31273 242 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 FRMD8P1Q9BZ68 369 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SUN2Q9UH99 717 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ZNF804BA4D1E1 1349 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SYNDIG1LA6NDD5 238 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TBKBP1A7MCY6 615 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 KLRF2D3W0D1 207 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 NSUN2Q08J23 767 aaKnown RBP eCLIP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TMC5Q6UXY8 1006 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SH2D3CQ8N5H7 860 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 CYP26B1Q9NR63 512 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ANP32DO95626 131 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SERPINB1P30740 379 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TBC1D10BQ4KMP7 808 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 DNAJC24Q6P3W2 148 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ZKSCAN4Q969J2 545 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 KIF28PB7ZC32 967 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 M0R3G1 203 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 HSPD1P10809 573 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TRMT10CQ7L0Y3 403 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 CNBD2Q96M20 576 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ZNF341Q9BYN7 854 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ROPN1BQ9BZX4 212 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ROPN1Q9HAT0 212 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 KIAA1586Q9HCI6 787 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 C8orf4Q9NR00 106 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TLK1Q9UKI8 766 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 RCOR1Q9UKL0 485 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ABCB11O95342 1321 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 PHF20L1A8MW92 1017 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 JAK2O60674 1132 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SRGAP2CP0DJJ0 459 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 NDUFA8P51970 172 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 DDX53Q86TM3 631 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 DBNDD2Q9BQY9 259 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 WWP1Q9H0M0 922 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 POLD4Q9HCU8 107 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 HDAC6Q9UBN7 1215 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ADCY10Q96PN6 1610 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 KIAA0391O15091 583 aaKnown RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 P4HA2O15460 535 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 PCSK2P16519 638 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SCTRP47872 440 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 ZNF658Q5TYW1 1059 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 TRIM67Q6ZTA4 783 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 SMYD3Q9H7B4 428 aa8.81□□□□□ -1
PPARGC1B-201ENST00000309241 FBXO2Q9UK22 296 aaPredicted RBP8.81□□□□□ -1
PPARGC1B-201ENST00000309241 MYH11P35749 1972 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ESYT3A0FGR9 886 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 WBP4O75554 376 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 OSTNP61366 133 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 PPP1R18Q6NYC8 613 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 EIF1ADQ8N9N8 165 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 EYA1Q99502 592 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 PITPNM2Q9BZ72 1349 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 USP17L12C9JPN9 530 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 USP17L21D6R901 530 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 TSPAN9O75954 239 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 MAP4P27816 1152 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 MDH1P40925 334 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 HABP4Q5JVS0 413 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ACAD11Q709F0 780 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 SYT2Q8N9I0 419 aaPredicted RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ZMYND8Q9ULU4 1186 aaPredicted RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 RPS6KA3P51812 740 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 SCARA5Q6ZMJ2 495 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ITIH6Q6UXX5 1313 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 MED14O60244 1454 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ATP1A3P13637 1013 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 S100A5P33763 92 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ABCE1P61221 599 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 GPATCH4Q5T3I0 446 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 KRT40Q6A162 431 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 TTLL6Q8N841 843 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 FSD1LQ9BXM9 530 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ASCC2Q9H1I8 757 aaPredicted RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 NFKBIL1Q9UBC1 381 aaPredicted RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 CNGA3Q16281 694 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 DARS2Q6PI48 645 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 NAF1Q96HR8 494 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 DNAJC12Q9UKB3 198 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 PXDNLA1KZ92 1463 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 MFAP3LO75121 409 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 VEPH1Q14D04 833 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 NDUFA5Q16718 116 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ASPRV1Q53RT3 343 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
PPARGC1B-201ENST00000309241 CALN1Q9BXU9 219 aa8.8□□□□□ -1
PPARGC1B-201ENST00000309241 ATP7AQ04656 1500 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms