RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ERO1BQ86YB8 467 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 RUSC1Q9BVN2 902 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 SLC12A6Q9UHW9 1150 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 C5orf60A6NFR6 353 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 E7EVH7 732 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 LIN7AO14910 233 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 DHX15O43143 795 aaKnown RBP11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 NR3C2P08235 984 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 GJA5P36382 358 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 PPATQ06203 517 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 IFT88Q13099 833 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 MTMR3Q13615 1198 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 KIAA0753Q2KHM9 967 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ARMC9Q7Z3E5 817 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 NCAPG2Q86XI2 1143 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 TRIM59Q8IWR1 403 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 CCDC13Q8IYE1 715 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 REEP2Q9BRK0 252 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 TEKT3Q9BXF9 490 aa11.15□□□□□ -0.62
APOBEC3F-201ENST00000308521 A0A087X0T9 212 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 KIF4AO95239 1232 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 FAM228BP0C875 321 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 PPP2R5CQ13362 524 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCDC121Q6ZUS5 278 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 ZC3H3Q8IXZ2 948 aaKnown RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 P3H4Q92791 437 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 ASCC2Q9H1I8 757 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 RABGAP1Q9Y3P9 1069 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 A0A0G2JLL6 359 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCDC188H7C350 402 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 CASP5P51878 434 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 KLHL30Q0D2K2 578 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 MTA1Q13330 715 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 GIT2Q14161 759 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 TRADDQ15628 312 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 UAP1Q16222 522 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 ASIC2Q16515 512 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 Q3C1V9 767 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 LBX2Q6XYB7 198 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 MIER3Q7Z3K6 550 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 PRRT2Q7Z6L0 340 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 SYT2Q8N9I0 419 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 LXNQ9BS40 222 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 GANQ9H2C0 597 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 PARP14Q460N5 1801 aa11.14□□□□□ -0.63
APOBEC3F-201ENST00000308521 SPDYE5A6NIY4 337 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 RGS20O76081 388 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 FDX1P10109 184 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 ANXA13P27216 316 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 ZNF844Q08AG5 666 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 LACTB2Q53H82 288 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 FAM26FQ5R3K3 315 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 KLHL7Q8IXQ5 586 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 POLR3CQ9BUI4 534 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 IKZF4Q9H2S9 585 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 SLC40A1Q9NP59 571 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 OTOFQ9HC10 1997 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 CYP2C8P10632 490 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 PPP2R2AP63151 447 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 HLTFQ14527 1009 aaKnown RBP eCLIP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 SPDYCQ5MJ68 293 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 ASTN1O14525 1302 aa11.13□□□□□ -0.63
APOBEC3F-201ENST00000308521 KCNK3O14649 394 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PGK2P07205 417 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 OAZ1P54368 228 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 GHRHRQ02643 423 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 RINT1Q6NUQ1 792 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PNMA8AQ86V59 439 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms